RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 PDXDC2PQ6P474 469 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 SH3RF1Q7Z6J0 888 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 NELFBQ8WX92 580 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 PCNTO95613 3336 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 FAM196BA6NMK8 535 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 TOM1O60784 492 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 MCM3P25205 808 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 CLNS1AP54105 237 aaKnown RBP19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 GTF2IP78347 998 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 KRT31Q15323 416 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 FERMT2Q96AC1 680 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 COA7Q96BR5 231 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 EYA3Q99504 573 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 CENPHQ9H3R5 247 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 CD209Q9NNX6 404 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 POLLQ9UGP5 575 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 FRMD3A2A2Y4 597 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 GOLGA6BA6NDN3 693 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 KIF5BP33176 963 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 NAPAP54920 295 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 RRP36Q96EU6 259 aaKnown RBP19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 PIGSQ96S52 555 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 NUP88Q99567 741 aaPredicted RBP19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 SELENOOQ9BVL4 669 aa19.19■□□□□ 0.66
LDLRAP1-201ENST00000374338 USP17L5A8MUK1 530 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 CDK8P49336 464 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 VPS72Q15906 364 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 CCDC40Q4G0X9 1142 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 CEP57Q86XR8 500 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 ADD3Q9UEY8 706 aaKnown RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 SH3BP1Q9Y3L3 701 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 TECP42680 631 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 CACNB3P54284 484 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 ZNF483Q8TF39 744 aaPredicted RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 GPCPD1Q9NPB8 672 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 PCDHA4Q9UN74 947 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 A0A1B0GUL6 1792 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 WNK3Q9BYP7 1800 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 RPN1P04843 607 aaKnown RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 EZH2Q15910 746 aaKnown RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 SPATS2Q86XZ4 545 aaKnown RBP19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 KIRREL3Q8IZU9 778 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 C4orf32Q8N8J7 132 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 PCDHAC2Q9Y5I4 1007 aa19.18■□□□□ 0.66
LDLRAP1-201ENST00000374338 NRAPQ86VF7 1730 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 A0A1B0GUA9 196 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 ANKRD33BA6NCL7 494 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 SEMA3EO15041 775 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 KLK7P49862 253 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 MTA3Q9BTC8 594 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 VCPKMTQ9H867 229 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 IRS2Q9Y4H2 1338 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 RCAN1P53805 252 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 PPP2R5BQ15173 497 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 ZKSCAN8Q15776 578 aaPredicted RBP19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 DTHD1Q6ZMT9 781 aa19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 NAA15Q9BXJ9 866 aaKnown RBP19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 REXO2Q9Y3B8 237 aaKnown RBP19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 AHDC1Q5TGY3 1603 aaPredicted RBP19.17■□□□□ 0.66
LDLRAP1-201ENST00000374338 BAG3O95817 575 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 SERPINB2P05120 415 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 UBA7P41226 1012 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 ZNF804AQ7Z570 1209 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 WDR66Q8TBY9 1149 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 HDAC7Q8WUI4 952 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 LAMB2P55268 1798 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 SLC16A2P36021 539 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 C2orf54Q08AI8 447 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 SBK1Q52WX2 424 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 SPTY2D1Q68D10 685 aaPredicted RBP19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.16■□□□□ 0.66
LDLRAP1-201ENST00000374338 SMCO2A6NFE2 343 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 STXBP3O00186 592 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 PDE2AO00408 941 aaPredicted RBP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 ERCC5P28715 1186 aaPredicted RBP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 PDCLQ13371 301 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 CCDC178Q5BJE1 867 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 YTHDF3Q7Z739 585 aaKnown RBP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 TATDN2Q93075 761 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 GSDMAQ96QA5 445 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 SLC40A1Q9NP59 571 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 TTF2Q9UNY4 1162 aaKnown RBP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 CASZ1Q86V15 1759 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 SKAP2O75563 359 aaPredicted RBP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 FCER1AP12319 257 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 TXKP42681 527 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 MATR3P43243 847 aaKnown RBP eCLIP19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 ATP1A2P50993 1020 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 UBXN1Q04323 297 aa19.15■□□□□ 0.66
LDLRAP1-201ENST00000374338 TXNRD1Q16881 649 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms