RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 FUT2Q10981 343 aa23.16■■□□□ 1.3
TMEM53-205ENST00000372244 GNASQ5JWF2 1037 aa23.16■■□□□ 1.3
TMEM53-205ENST00000372244 Q6ZUG5 572 aa23.16■■□□□ 1.3
TMEM53-205ENST00000372244 NOL8Q76FK4 1167 aaKnown RBP23.16■■□□□ 1.3
TMEM53-205ENST00000372244 PCSK9Q8NBP7 692 aaKnown RBP23.16■■□□□ 1.3
TMEM53-205ENST00000372244 ZSWIM6Q9HCJ5 1215 aa23.16■■□□□ 1.3
TMEM53-205ENST00000372244 RBM28Q9NW13 759 aaKnown RBP23.16■■□□□ 1.3
TMEM53-205ENST00000372244 KLF18A0A0U1RQI7 1052 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 A0A1W2PQ45 241 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-205ENST00000372244 A0A1W2PQY0 241 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 GCOM1H8Y6P7 765 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-205ENST00000372244 POLR2MP0CAP2 368 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 CASTP20810 708 aaKnown RBP23.15■■□□□ 1.3
TMEM53-205ENST00000372244 CCDC82Q8N4S0 544 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 TM6SF1Q9BZW5 370 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 PXMP2Q9NR77 195 aa23.15■■□□□ 1.3
TMEM53-205ENST00000372244 SEC63Q9UGP8 760 aaKnown RBP23.15■■□□□ 1.3
TMEM53-205ENST00000372244 DYNC1LI2O43237 492 aaPredicted RBP23.14■■□□□ 1.29
TMEM53-205ENST00000372244 NR3C2P08235 984 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 PTGS1P23219 599 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 HOXA13P31271 388 aaPredicted RBP23.14■■□□□ 1.29
TMEM53-205ENST00000372244 PPP2R5BQ15173 497 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 STXBP2Q15833 593 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 ARHGEF16Q5VV41 709 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 RUFY3Q7L099 469 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 TLK2Q86UE8 772 aa23.14■■□□□ 1.29
TMEM53-205ENST00000372244 ASGR1P07306 291 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 EVCP57679 992 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 RTP1P59025 263 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 FGD1P98174 961 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 RTN1Q16799 776 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 SCFD2Q8WU76 684 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 BRF1Q92994 677 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 AP5M1Q9H0R1 490 aa23.13■■□□□ 1.29
TMEM53-205ENST00000372244 ELP1O95163 1332 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 EIF3JO75822 258 aaKnown RBP23.12■■□□□ 1.29
TMEM53-205ENST00000372244 EIF2AK2P19525 551 aaKnown RBP23.12■■□□□ 1.29
TMEM53-205ENST00000372244 CDC27P30260 824 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 FSCN1Q16658 493 aaKnown RBP23.12■■□□□ 1.29
TMEM53-205ENST00000372244 CCDC62Q6P9F0 684 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 VSIG10LQ86VR7 867 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 PDCD2LQ9BRP1 358 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 PRO3102Q9H379 93 aa23.12■■□□□ 1.29
TMEM53-205ENST00000372244 COLQQ9Y215 455 aaPredicted RBP23.12■■□□□ 1.29
TMEM53-205ENST00000372244 hCG_1642624A0A1W2PR95 340 aa23.11■■□□□ 1.29
TMEM53-205ENST00000372244 PIK3CDO00329 1044 aa23.11■■□□□ 1.29
TMEM53-205ENST00000372244 NKRFO15226 690 aaKnown RBP eCLIP23.11■■□□□ 1.29
TMEM53-205ENST00000372244 BEX3Q00994 111 aa23.11■■□□□ 1.29
TMEM53-205ENST00000372244 ZMYND8Q9ULU4 1186 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-205ENST00000372244 MEIS2O14770 477 aa23.11■■□□□ 1.29
TMEM53-205ENST00000372244 V9GY48 417 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-205ENST00000372244 LRRC37A2A6NM11 1700 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 CNTNAP5Q8WYK1 1306 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 GOLGA8AA7E2F4 631 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 GOLGA8BA8MQT2 603 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 TXNP10599 105 aaKnown RBP23.1■■□□□ 1.29
TMEM53-205ENST00000372244 ADD1P35611 737 aaKnown RBP23.1■■□□□ 1.29
TMEM53-205ENST00000372244 TTLL4Q14679 1199 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 PGM5Q15124 567 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 TRIM60Q495X7 471 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 FCHSD1Q86WN1 690 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 GLT1D1Q96MS3 346 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 STARD7Q9NQZ5 370 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 ATP11BQ9Y2G3 1177 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 CYP46A1Q9Y6A2 500 aa23.1■■□□□ 1.29
TMEM53-205ENST00000372244 CCDC196A0A1B0GTZ2 297 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 RGS20O76081 388 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 ARIH2O95376 493 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 SYN1P17600 705 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 METAP2P50579 478 aaKnown RBP eCLIP23.09■■□□□ 1.29
TMEM53-205ENST00000372244 CDK7P50613 346 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 USP17L6PQ6QN14 398 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 SEPT14Q6ZU15 432 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 ANKRD33Q7Z3H0 272 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 TOX2Q96NM4 488 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 TRIOBPQ9H2D6 2365 aa23.09■■□□□ 1.29
TMEM53-205ENST00000372244 NID2Q14112 1375 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 FRMPD4Q14CM0 1322 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 TLE2Q04725 743 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 TOB2Q14106 344 aaPredicted RBP23.08■■□□□ 1.29
TMEM53-205ENST00000372244 CHRDL2Q6WN34 429 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 IL17RAQ96F46 866 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 GDF15Q99988 308 aa23.08■■□□□ 1.29
TMEM53-205ENST00000372244 ZEB2O60315 1214 aa23.07■■□□□ 1.28
TMEM53-205ENST00000372244 CABYRO75952 493 aa23.07■■□□□ 1.28
TMEM53-205ENST00000372244 PDIA3P30101 505 aaKnown RBP23.07■■□□□ 1.28
TMEM53-205ENST00000372244 CXCL17Q6UXB2 119 aa23.07■■□□□ 1.28
TMEM53-205ENST00000372244 IL31RAQ8NI17 732 aa23.07■■□□□ 1.28
TMEM53-205ENST00000372244 COPS5Q92905 334 aa23.07■■□□□ 1.28
TMEM53-205ENST00000372244 DDX41Q9UJV9 622 aaKnown RBP23.07■■□□□ 1.28
TMEM53-205ENST00000372244 NAP1L2Q9ULW6 460 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-205ENST00000372244 A6NJR5 290 aa23.06■■□□□ 1.28
TMEM53-205ENST00000372244 EIF5BO60841 1220 aaKnown RBP23.06■■□□□ 1.28
TMEM53-205ENST00000372244 MYCLP12524 364 aaPredicted RBP23.06■■□□□ 1.28
TMEM53-205ENST00000372244 ANAPC15P60006 121 aa23.06■■□□□ 1.28
TMEM53-205ENST00000372244 LY6KQ17RY6 165 aa23.06■■□□□ 1.28
TMEM53-205ENST00000372244 HABP4Q5JVS0 413 aaKnown RBP23.06■■□□□ 1.28
TMEM53-205ENST00000372244 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms