RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 IMPACTQ9P2X3 320 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 CLTCQ00610 1675 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 TLR3O15455 904 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ACTN4O43707 911 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ADCK5Q3MIX3 580 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 KRT222Q8N1A0 295 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ARHGEF2Q92974 986 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ATP6V0A1Q93050 837 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF341Q9BYN7 854 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 NKIRAS1Q9NYS0 192 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SYNDIG1LA6NDD5 238 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 CDK8P49336 464 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 KRT33BQ14525 404 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 MTRQ99707 1265 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 FAM184BQ9ULE4 1060 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 COBLO75128 1261 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 KIAA1841Q6NSI8 718 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 CEP120Q8N960 986 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 ARHGEF1Q92888 912 aaKnown RBP10.72□□□□□ -0.69
COL4A6-202ENST00000372216 RGS12O14924 1447 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 H7C1W4 665 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 BRD1O95696 1058 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 ABCB4P21439 1286 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 PDE6CP51160 858 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 PHLDB2Q86SQ0 1253 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF513Q8N8E2 541 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-202ENST00000372216 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 GABPB2Q8TAK5 448 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-202ENST00000372216 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 RILPQ96NA2 401 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 FEZ2Q9UHY8 353 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-202ENST00000372216 BRD3Q15059 726 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 SYNE4Q8N205 404 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 FIS1Q9Y3D6 152 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 GSTA1P08263 222 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 GSTA2P09210 222 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 ATP5DP30049 168 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 CDC37Q16543 378 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-202ENST00000372216 APOA5Q6Q788 366 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 RSAD2Q8WXG1 361 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 CCDC127Q96BQ5 260 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 SLITRK6Q9H5Y7 841 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
COL4A6-202ENST00000372216 CYP21A2P08686 494 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 STAT1P42224 750 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 VPS41P49754 854 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CACNB3P54284 484 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 ADAM9Q13443 819 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 KRBA2Q6ZNG9 492 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CTAGE3PQ8IX95 158 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CDC26Q8NHZ8 85 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 LMCD1Q9NZU5 365 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 ARMCX3Q9UH62 379 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CRB1P82279 1406 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 MYL3P08590 195 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 MARK3P27448 753 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 UBE2SQ16763 222 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 FYB2Q5VWT5 728 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 MCUQ8NE86 351 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 NLRP7Q8WX94 980 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 RNF26Q9BY78 433 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 DISC1Q9NRI5 854 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 LARSQ9P2J5 1176 aaKnown RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 SFMBT1Q9UHJ3 866 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 RNF17Q9BXT8 1623 aaKnown RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 LAD1O00515 517 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 SH2B2O14492 632 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 BUB1BO60566 1050 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 CMA1P23946 247 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 OSTNP61366 133 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 HP1BP3Q5SSJ5 553 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-202ENST00000372216 IQCDQ96DY2 449 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 MTMR6Q9Y217 621 aa10.71□□□□□ -0.69
COL4A6-202ENST00000372216 EVCP57679 992 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 RPS6KA1Q15418 735 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 AFAP1L2Q8N4X5 818 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 TBCKQ8TEA7 893 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF277Q9NRM2 450 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-202ENST00000372216 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 hCG_1984214I3L0E3 225 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF827Q17R98 1081 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 FAM160B2Q86V87 743 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF713Q8N859 430 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-202ENST00000372216 CERKQ8TCT0 537 aa10.71□□□□□ -0.7
COL4A6-202ENST00000372216 IFIH1Q9BYX4 1025 aaKnown RBP10.71□□□□□ -0.7
COL4A6-202ENST00000372216 FOXP1Q9H334 677 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms