RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 MAP3K14Q99558 947 aa16.76■□□□□ 0.27
EDF1-202ENST00000371648 LZTS2Q9BRK4 669 aa16.76■□□□□ 0.27
EDF1-202ENST00000371648 AMNQ9BXJ7 453 aa16.76■□□□□ 0.27
EDF1-202ENST00000371648 SEMA6BQ9H3T3 888 aa16.76■□□□□ 0.27
EDF1-202ENST00000371648 CYP39A1Q9NYL5 469 aa16.76■□□□□ 0.27
EDF1-202ENST00000371648 BAZ2BQ9UIF8 2168 aaKnown RBP16.76■□□□□ 0.27
EDF1-202ENST00000371648 ASTN1O14525 1302 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 ABCB11O95342 1321 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
EDF1-202ENST00000371648 ARVCFO00192 962 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 ZBTB5O15062 677 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 TIMP1P01033 207 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
EDF1-202ENST00000371648 PTGS1P23219 599 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 TRAF1Q13077 416 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 Q6ZUG5 572 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 PIGSQ96S52 555 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 PDGFCQ9NRA1 345 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 TBX21Q9UL17 535 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
EDF1-202ENST00000371648 MCM3APO60318 1980 aa16.75■□□□□ 0.27
EDF1-202ENST00000371648 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 DYNC1LI2O43237 492 aaPredicted RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 SMPD1P17405 629 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 CXCL17Q6UXB2 119 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 FBXO16Q8IX29 292 aaPredicted RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 RRP36Q96EU6 259 aaKnown RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 RIOX1Q9H6W3 641 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
EDF1-202ENST00000371648 PCDHA1Q9Y5I3 950 aa16.74■□□□□ 0.27
EDF1-202ENST00000371648 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 ZBTB43O43298 467 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 RPS6KB1P23443 525 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 TMEM63BQ5T3F8 832 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 TLK2Q86UE8 772 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
EDF1-202ENST00000371648 TTYH1Q9H313 450 aaPredicted RBP16.73■□□□□ 0.27
EDF1-202ENST00000371648 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
EDF1-202ENST00000371648 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
EDF1-202ENST00000371648 TLR3O15455 904 aaKnown RBP16.72■□□□□ 0.27
EDF1-202ENST00000371648 CYTH3O43739 400 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 RPS6P62753 249 aaKnown RBP16.72■□□□□ 0.27
EDF1-202ENST00000371648 NKX3-2P78367 333 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 FSCN1Q16658 493 aaKnown RBP16.72■□□□□ 0.27
EDF1-202ENST00000371648 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 TAPT1Q6NXT6 567 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 FAM126BQ8IXS8 530 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 RGS22Q8NE09 1264 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 BRF1Q92994 677 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 MTMR8Q96EF0 704 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
EDF1-202ENST00000371648 PPP1R12CQ9BZL4 782 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
EDF1-202ENST00000371648 B4DLN1 442 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 CFBP00751 764 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 MRPL12P52815 198 aaKnown RBP16.71■□□□□ 0.27
EDF1-202ENST00000371648 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 RTN1Q16799 776 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
EDF1-202ENST00000371648 MYLIPQ8WY64 445 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
EDF1-202ENST00000371648 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.279e-23■■■□□ 16
EDF1-202ENST00000371648 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
EDF1-202ENST00000371648 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.7■□□□□ 0.26
EDF1-202ENST00000371648 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.7■□□□□ 0.26
EDF1-202ENST00000371648 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 GOLGA8BA8MQT2 603 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 ZEB2O60315 1214 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
EDF1-202ENST00000371648 CABYRO75952 493 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 ACRP10323 421 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 CSF2RAP15509 400 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■□□□□ 9.2
EDF1-202ENST00000371648 ITGA7Q13683 1181 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 SLC35G1Q2M3R5 365 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 C16orf59Q7L2K0 433 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
EDF1-202ENST00000371648 TMEM199Q8N511 208 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 ZSWIM6Q9HCJ5 1215 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
EDF1-202ENST00000371648 CD4P01730 458 aa16.69■□□□□ 0.26
EDF1-202ENST00000371648 CYP2C18P33260 490 aa16.69■□□□□ 0.26
EDF1-202ENST00000371648 ALDH5A1P51649 535 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms