RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 FAM178BQ8IXR5 827 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 SH3RF3Q8TEJ3 882 aaPredicted RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 DPH5Q9H2P9 285 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 H0YIN7 160 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 PRCPP42785 496 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 CASP8Q14790 479 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 FBF1Q8TES7 1133 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
COPA-202ENST00000368069 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 SF3A3Q12874 501 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■□□ 15.7
COPA-202ENST00000368069 UBE2SQ16763 222 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
COPA-202ENST00000368069 ENGASEQ8NFI3 743 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.84□□□□□ -0.35
COPA-202ENST00000368069 ADGRG1Q9Y653 693 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 ATP5DP30049 168 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 KCTD16Q68DU8 428 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
COPA-202ENST00000368069 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
COPA-202ENST00000368069 KIF11P52732 1056 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 LIN9Q5TKA1 542 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.35
COPA-202ENST00000368069 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 ADAT2Q7Z6V5 191 aaKnown RBP12.83□□□□□ -0.35
COPA-202ENST00000368069 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.35
COPA-202ENST00000368069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.357e-7■■■■□ 24.4
COPA-202ENST00000368069 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 JRKLQ9Y4A0 524 aa12.83□□□□□ -0.35
COPA-202ENST00000368069 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 CSF1RP07333 972 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
COPA-202ENST00000368069 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 DENND2CQ68D51 928 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 PCDHA13Q9Y5I0 950 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.363e-8■■■■□ 21.7
COPA-202ENST00000368069 MTF1Q14872 753 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 CLUL1Q15846 466 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 HEXIM1O94992 359 aaKnown RBP12.83□□□□□ -0.36
COPA-202ENST00000368069 FTCDO95954 541 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 GYS2P54840 703 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 WDR24Q96S15 920 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
COPA-202ENST00000368069 K7ENM7 598 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 EPHB4P54760 987 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 NAA35Q5VZE5 725 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 CCDC17Q96LX7 622 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 POLR2MP0CAP2 368 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 USTQ9Y2C2 406 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 PPFIA4O75335 1185 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 FOSP01100 380 aaPredicted RBP12.82□□□□□ -0.36
COPA-202ENST00000368069 GRAPQ13588 217 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 SETDB1Q15047 1291 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 CCDC6Q16204 474 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 C6orf163Q5TEZ5 329 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 CROCCP2Q86T23 111 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
COPA-202ENST00000368069 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
COPA-202ENST00000368069 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 COL15A1P39059 1388 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 AP5Z1O43299 807 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
COPA-202ENST00000368069 STRN3Q13033 797 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 PLCB1Q9NQ66 1216 aa12.82□□□□□ -0.36
COPA-202ENST00000368069 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
COPA-202ENST00000368069 MEIS1O00470 390 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 SRGAP2O75044 1071 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 AFPP02771 609 aaKnown RBP12.81□□□□□ -0.36
COPA-202ENST00000368069 SERPINB2P05120 415 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 CCT5P48643 541 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 MSANTD4Q8NCY6 345 aa12.81□□□□□ -0.36
COPA-202ENST00000368069 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
COPA-202ENST00000368069 BZW2Q9Y6E2 419 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms