RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 MAP7D1Q3KQU3 841 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RCSD1Q6JBY9 416 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 BARGINQ6ZT62 677 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 KCTD1Q719H9 257 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CCDC110Q8TBZ0 833 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 P3H4Q92791 437 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 FAM207AQ9NSI2 230 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TECPR2O15040 1411 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SLFN14P0C7P3 912 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 MAN1A1P33908 653 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SIRT2Q8IXJ6 389 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ZNF579Q8NAF0 562 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TBCKQ8TEA7 893 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ATP2A3Q93084 1043 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ANKRD36BP1Q96IX9 119 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ZNF512BQ96KM6 892 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SELENOSQ9BQE4 189 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CD209Q9NNX6 404 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CLIC4Q9Y696 253 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CPDO75976 1380 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 UTYO14607 1347 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 PSAPP07602 524 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TCP1P17987 556 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 JAK3P52333 1124 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 KIF23Q02241 960 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 KMT5BQ4FZB7 885 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TYW1BQ6NUM6 668 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 B4GALNT4Q76KP1 1039 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 FAM193BQ96PV7 902 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ANTXR1Q9H6X2 564 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TYW1Q9NV66 732 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SRP68Q9UHB9 627 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SEPT9Q9UHD8 586 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 HERC5Q9UII4 1024 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 SPATA31D1Q6ZQQ2 1576 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CLRN2A0PK11 232 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 LMNB2Q03252 620 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 EXOC3L4Q17RC7 722 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RASEFQ8IZ41 740 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 LINC00301Q8NCQ3 95 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 BBOF1Q8ND07 529 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 OGFRQ9NZT2 677 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 TLR3O15455 904 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 CRKP46108 304 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 MXRA7P84157 204 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RABL6Q3YEC7 729 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 LRRIQ4A6NIV6 560 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 LRRC63Q05C16 580 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 FYB2Q5VWT5 728 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ZNF341Q9BYN7 854 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 PARVGQ9HBI0 331 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 PIH1D3Q9NQM4 214 aaKnown RBP5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ASIC3Q9UHC3 531 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 RWDD2AQ9UIY3 292 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 MROH7-TTC4A0A0A0MT08 1334 aa5.33□□□□□ -1.56
SCN3A-202ENST00000360093 ZNF233A6NK53 670 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 UTP14CQ5TAP6 766 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CCDC121Q6ZUS5 278 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 RAB20Q9NX57 234 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 GIPC1O14908 333 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 STAM2O75886 525 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 RAD17O75943 681 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CAPN2P17655 700 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 PHBP35232 272 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 SPOUT1Q5T280 376 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 SLFN12LQ6IEE8 588 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 KCNK9Q9NPC2 374 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CEP104O60308 925 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 PPFIA1Q13136 1202 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 MAN2A1Q16706 1144 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 ARHGAP44Q17R89 818 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 FAM47CQ5HY64 1035 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 TBC1D9BQ66K14 1250 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 DAAM2Q86T65 1068 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 LRRC8AQ8IWT6 810 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 NEK9Q8TD19 979 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CCT6BQ92526 530 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 ARHGEF1Q92888 912 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 P2RX5Q93086 422 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 TUBGCP2Q9BSJ2 902 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 HYOU1Q9Y4L1 999 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 PNPLA7Q6ZV29 1317 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 PTPREP23469 700 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 COPB1P53618 953 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CCDC105Q8IYK2 499 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 TCP11Q8WWU5 503 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 SLC10A4Q96EP9 437 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CNOT6LQ96LI5 555 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 MXD3Q9BW11 206 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 LCMT1Q9UIC8 334 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 RIPOR2Q9Y4F9 1068 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 USP42Q9H9J4 1324 aaKnown RBP5.32□□□□□ -1.56
SCN3A-202ENST00000360093 CAPN9O14815 690 aa5.32□□□□□ -1.56
SCN3A-202ENST00000360093 HNRNPDLO14979 420 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms