RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GRB10Q13322 594 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 BARGINQ6ZT62 677 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 POTEDQ86YR6 584 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 CREG2Q8IUH2 290 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 GSPT2Q8IYD1 628 aaKnown RBP27.29■■□□□ 1.96
CPNE1-202ENST00000352393 CCDC24Q8N4L8 307 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 MMGT1Q8N4V1 131 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 TBCKQ8TEA7 893 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 RRP36Q96EU6 259 aaKnown RBP27.29■■□□□ 1.96
CPNE1-202ENST00000352393 BLOC1S4Q9NUP1 217 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 RRP15Q9Y3B9 282 aaKnown RBP27.29■■□□□ 1.96
CPNE1-202ENST00000352393 EPHB6O15197 1021 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 CCDC96Q2M329 555 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 MAPKAPK5Q8IW41 473 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 IFIH1Q9BYX4 1025 aaKnown RBP27.28■■□□□ 1.96
CPNE1-202ENST00000352393 SLC39A2Q9NP94 309 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 STK17AQ9UEE5 414 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 SAP30BPQ9UHR5 308 aaKnown RBP27.28■■□□□ 1.96
CPNE1-202ENST00000352393 ESYT2A0FGR8 921 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 USO1O60763 962 aaKnown RBP27.28■■□□□ 1.96
CPNE1-202ENST00000352393 TACC1O75410 805 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 SMARCA1P28370 1054 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 LRRC31Q6UY01 552 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-202ENST00000352393 UNC13DQ70J99 1090 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 SMCR8Q8TEV9 937 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-202ENST00000352393 NDST4Q9H3R1 872 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 PCDHA13Q9Y5I0 950 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 NHSQ6T4R5 1651 aa27.28■■□□□ 1.96
CPNE1-202ENST00000352393 KIF11P52732 1056 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 MAN2A1Q16706 1144 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 FOXR1Q6PIV2 292 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 C16orf86Q6ZW13 317 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 SV2BQ7L1I2 683 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 NEDD1Q8NHV4 660 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 AENQ8WTP8 325 aaKnown RBP27.27■■□□□ 1.96
CPNE1-202ENST00000352393 RUBCNQ92622 972 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 RTFDC1Q9BY42 306 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-202ENST00000352393 ZNF287Q9HBT7 754 aa27.27■■□□□ 1.96
CPNE1-202ENST00000352393 PVALEFA0A1B0GWK0 134 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 MYMKA6NI61 221 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 PRLRP16471 622 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 SOGA3Q5TF21 947 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 C2CD5Q86YS7 1000 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 PNMA5Q96PV4 448 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 MTMR9Q96QG7 549 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 EYA3Q99504 573 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 MLXIPQ9HAP2 919 aa27.26■■□□□ 1.96
CPNE1-202ENST00000352393 USP17L2Q6R6M4 530 aa27.26■■□□□ 1.95
CPNE1-202ENST00000352393 REXO1Q8N1G1 1221 aaKnown RBP27.26■■□□□ 1.95
CPNE1-202ENST00000352393 GOLGA6L1Q8N7Z2 621 aa27.26■■□□□ 1.95
CPNE1-202ENST00000352393 SEC63Q9UGP8 760 aaKnown RBP27.26■■□□□ 1.95
CPNE1-202ENST00000352393 CDK8P49336 464 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 FXR2P51116 673 aaKnown RBP eCLIP27.25■■□□□ 1.952e-6■■■□□ 18.4
CPNE1-202ENST00000352393 TPTE2Q6XPS3 522 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 SLC51AQ86UW1 340 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 GUF1Q8N442 669 aaKnown RBP27.25■■□□□ 1.95
CPNE1-202ENST00000352393 CRACR2AQ9BSW2 395 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 FAM207AQ9NSI2 230 aaPredicted RBP27.25■■□□□ 1.95
CPNE1-202ENST00000352393 MYH10P35580 1976 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 AGPSO00116 658 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 LDHCP07864 332 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 GGCXP38435 758 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 EIF4A3P38919 411 aaKnown RBP27.25■■□□□ 1.95
CPNE1-202ENST00000352393 GDAP1L1Q96MZ0 367 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 PIGSQ96S52 555 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 FAM184BQ9ULE4 1060 aa27.25■■□□□ 1.95
CPNE1-202ENST00000352393 CCDC70Q6NSX1 233 aa27.24■■□□□ 1.95
CPNE1-202ENST00000352393 RIN2Q8WYP3 895 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-202ENST00000352393 RASSF4Q9H2L5 321 aa27.24■■□□□ 1.95
CPNE1-202ENST00000352393 BIN2Q9UBW5 565 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-202ENST00000352393 LEMD3Q9Y2U8 911 aa27.24■■□□□ 1.95
CPNE1-202ENST00000352393 MOCS3O95396 460 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 TXKP42681 527 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 LRRC55Q6ZSA7 311 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 CCDC84Q86UT8 332 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-202ENST00000352393 LARP4BQ92615 738 aaKnown RBP27.23■■□□□ 1.95
CPNE1-202ENST00000352393 TMEM260Q9NX78 707 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 TRIM66O15016 1216 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 RPS6KA4O75676 772 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 LRRC63Q05C16 580 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 CALCRLQ16602 461 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 BAP1Q92560 729 aa27.23■■□□□ 1.95
CPNE1-202ENST00000352393 LRRC53A6NM62 1247 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 PJA2O43164 708 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 FGFR1OPO95684 399 aaKnown RBP27.22■■□□□ 1.95
CPNE1-202ENST00000352393 NOVP48745 357 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 RC3H1Q5TC82 1133 aaKnown RBP27.22■■□□□ 1.95
CPNE1-202ENST00000352393 CERS3Q8IU89 383 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 OSBPL9Q96SU4 736 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 ANKIB1Q9P2G1 1089 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 HYOU1Q9Y4L1 999 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 hCG_1984214I3L0E3 225 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 HOXA7P31268 230 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-202ENST00000352393 EHHADHQ08426 723 aa27.22■■□□□ 1.95
CPNE1-202ENST00000352393 ZNF713Q8N859 430 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-202ENST00000352393 TCP1P17987 556 aaKnown RBP27.21■■□□□ 1.95
CPNE1-202ENST00000352393 BTDP43251 543 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 EZH2Q15910 746 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms