RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HPSEQ9Y251 543 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PRPHP41219 470 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 IRX3P78415 501 aaPredicted RBP19.64■□□□□ 0.73
CLDN4-201ENST00000340958 ARHGAP4P98171 946 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
CLDN4-201ENST00000340958 SPRYD7Q5W111 196 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 PDILTQ8N807 584 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 TBC1D5Q92609 795 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 WNK4Q96J92 1243 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 TRERF1Q96PN7 1200 aa19.64■□□□□ 0.73
CLDN4-201ENST00000340958 GJA5P36382 358 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
CLDN4-201ENST00000340958 TMEM266Q2M3C6 531 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 SNRNP48Q6IEG0 339 aaKnown RBP19.63■□□□□ 0.73
CLDN4-201ENST00000340958 SASS6Q6UVJ0 657 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
CLDN4-201ENST00000340958 CNNM3Q8NE01 707 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 CCDC34Q96HJ3 373 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 EPSTI1Q96J88 318 aa19.63■□□□□ 0.73
CLDN4-201ENST00000340958 HOOK1Q9UJC3 728 aaKnown RBP19.63■□□□□ 0.73
CLDN4-201ENST00000340958 POLR2DO15514 142 aaKnown RBP19.62■□□□□ 0.73
CLDN4-201ENST00000340958 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 TXKP42681 527 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 OAZ1P54368 228 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 MYPNQ86TC9 1320 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 FAM237AA0A1B0GTK4 181 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 NFIBO00712 420 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 SLC37A4O43826 429 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 SREBF1P36956 1147 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 PABPC4Q13310 644 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLDN4-201ENST00000340958 SNAPC2Q13487 334 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 IL17AQ16552 155 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 GAS2L3Q86XJ1 694 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 TIGD1Q96MW7 591 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 KCNH4Q9UQ05 1017 aa19.62■□□□□ 0.73
CLDN4-201ENST00000340958 SPDYE16A6NNV3 312 aaPredicted RBP19.61■□□□□ 0.73
CLDN4-201ENST00000340958 ZBTB48P10074 688 aaPredicted RBP19.61■□□□□ 0.73
CLDN4-201ENST00000340958 TECP42680 631 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 NSMFQ6X4W1 530 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 USP49Q70CQ1 688 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 TEX13BQ9BXU2 312 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 RAB34Q9BZG1 259 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 RNF146Q9NTX7 359 aa19.61■□□□□ 0.73
CLDN4-201ENST00000340958 OSBPP22059 807 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 UBA7P41226 1012 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 TMEM132BQ14DG7 1078 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 MUM1L1Q5H9M0 696 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 L1TD1Q5T7N2 865 aaKnown RBP19.6■□□□□ 0.73
CLDN4-201ENST00000340958 CLEC4DQ8WXI8 215 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 DHX58Q96C10 678 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 P2RX7Q99572 595 aaKnown RBP19.6■□□□□ 0.73
CLDN4-201ENST00000340958 PYM1Q9BRP8 204 aaKnown RBP19.6■□□□□ 0.73
CLDN4-201ENST00000340958 ADAMTS5Q9UNA0 930 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 AGTPBP1Q9UPW5 1226 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 HOXA7P31268 230 aaPredicted RBP19.6■□□□□ 0.73
CLDN4-201ENST00000340958 STAT3P40763 770 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 LONRF3Q496Y0 759 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 PRR16Q569H4 304 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 KRBA2Q6ZNG9 492 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 RNF207Q6ZRF8 634 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 CEP57L1Q8IYX8 460 aa19.6■□□□□ 0.73
CLDN4-201ENST00000340958 FOXN1O15353 648 aa19.59■□□□□ 0.73
CLDN4-201ENST00000340958 HSD17B4P51659 736 aa19.59■□□□□ 0.73
CLDN4-201ENST00000340958 MOXD1Q6UVY6 613 aa19.59■□□□□ 0.73
CLDN4-201ENST00000340958 SAMD3Q8N6K7 520 aa19.59■□□□□ 0.73
CLDN4-201ENST00000340958 AK8Q96MA6 479 aa19.59■□□□□ 0.73
CLDN4-201ENST00000340958 MAP3K20Q9NYL2 800 aaKnown RBP19.59■□□□□ 0.73
CLDN4-201ENST00000340958 CDC25AP30304 524 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 UBXN2AP68543 259 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 KANK3Q6NY19 840 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 MB21D1Q8N884 522 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 REPS2Q8NFH8 660 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 MTMR9Q96QG7 549 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 BEGAINQ9BUH8 593 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 CCDC39Q9UFE4 941 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 SERTAD1Q9UHV2 236 aa19.58■□□□□ 0.73
CLDN4-201ENST00000340958 ZNF214Q9UL59 606 aaPredicted RBP19.58■□□□□ 0.73
CLDN4-201ENST00000340958 CYP3A7-CYP3A51PA0A087WV96 503 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 EDIL3O43854 480 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 CYP3A7P24462 503 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 IQUBQ8NA54 791 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 ERCC4Q92889 916 aaPredicted RBP19.58■□□□□ 0.72
CLDN4-201ENST00000340958 ASCC2Q9H1I8 757 aaPredicted RBP19.58■□□□□ 0.72
CLDN4-201ENST00000340958 TTC12Q9H892 705 aaPredicted RBP19.58■□□□□ 0.72
CLDN4-201ENST00000340958 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 RIPK3Q9Y572 518 aa19.58■□□□□ 0.72
CLDN4-201ENST00000340958 FSD2A1L4K1 749 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 ATP2A1O14983 1001 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 RPS6P62753 249 aaKnown RBP19.57■□□□□ 0.72
CLDN4-201ENST00000340958 TYRO3Q06418 890 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
CLDN4-201ENST00000340958 SLFN12Q8IYM2 578 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 PAGR1Q9BTK6 254 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 ACAD9Q9H845 621 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 GRPEL1Q9HAV7 217 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 LRWD1Q9UFC0 647 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 PCDHA12Q9UN75 941 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms