RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 C16orf59Q7L2K0 433 aa19.85■□□□□ 0.77
BRCC3-202ENST00000340647 RALYLQ86SE5 291 aaKnown RBP19.85■□□□□ 0.77
BRCC3-202ENST00000340647 MYL10Q9BUA6 226 aa19.85■□□□□ 0.77
BRCC3-202ENST00000340647 AMNQ9BXJ7 453 aa19.85■□□□□ 0.77
BRCC3-202ENST00000340647 AP5M1Q9H0R1 490 aa19.85■□□□□ 0.77
BRCC3-202ENST00000340647 MRPL11Q9Y3B7 192 aaKnown RBP19.85■□□□□ 0.77
BRCC3-202ENST00000340647 DOCK5Q9H7D0 1870 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 DCDC2CA8MYV0 355 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 DHX16O60231 1041 aaKnown RBP19.84■□□□□ 0.77
BRCC3-202ENST00000340647 TIMP1P01033 207 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 ITGA7Q13683 1181 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 VWCEQ96DN2 955 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 SCN5AQ14524 2016 aa19.84■□□□□ 0.77
BRCC3-202ENST00000340647 UMODL1Q5DID0 1318 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 PRUNE2Q8WUY3 3088 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 SH2B2O14492 632 aaPredicted RBP19.83■□□□□ 0.77
BRCC3-202ENST00000340647 RAG1P15918 1043 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 PURAQ00577 322 aaKnown RBP19.83■□□□□ 0.77
BRCC3-202ENST00000340647 ZNF654Q8IZM8 581 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 PPP1R13LQ8WUF5 828 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 VTI1AQ96AJ9 217 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 GUCD1Q96NT3 240 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 RMDN3Q96TC7 470 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 PXMP2Q9NR77 195 aa19.83■□□□□ 0.77
BRCC3-202ENST00000340647 TRIP12Q14669 1992 aaPredicted RBP19.83■□□□□ 0.76
BRCC3-202ENST00000340647 MROH7Q68CQ1 1323 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 A6NJR5 290 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 PRC1O43663 620 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 CABYRO75952 493 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 RGS20O76081 388 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 CFBP00751 764 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 HOMER1Q86YM7 354 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 MCF2L2Q86YR7 1114 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 RASEFQ8IZ41 740 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 NSUN6Q8TEA1 469 aaKnown RBP19.82■□□□□ 0.76
BRCC3-202ENST00000340647 SCFD2Q8WU76 684 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 TRPV6Q9H1D0 765 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 PCDHA1Q9Y5I3 950 aa19.82■□□□□ 0.76
BRCC3-202ENST00000340647 B4GALT4O60513 344 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 HOXA13P31271 388 aaPredicted RBP19.81■□□□□ 0.76
BRCC3-202ENST00000340647 MFSD5Q6N075 450 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 OR6J1Q8NGC5 347 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 IWS1Q96ST2 819 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 MAP3K14Q99558 947 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 MTA3Q9BTC8 594 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 LRRC2Q9BYS8 371 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 ANO2Q9NQ90 1003 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 GBF1Q92538 1859 aa19.81■□□□□ 0.76
BRCC3-202ENST00000340647 PNMA6FA0A0J9YX94 578 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 ERICH2A1L162 156 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 TXNP10599 105 aaKnown RBP19.8■□□□□ 0.76
BRCC3-202ENST00000340647 EIF2AK2P19525 551 aaKnown RBP19.8■□□□□ 0.76
BRCC3-202ENST00000340647 ARHGAP1Q07960 439 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 PPP2R5BQ15173 497 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 LY6KQ17RY6 165 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 SEPT14Q6ZU15 432 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 PDCD2LQ9BRP1 358 aa19.8■□□□□ 0.76
BRCC3-202ENST00000340647 NKRFO15226 690 aaKnown RBP eCLIP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 PLEKHA8P1O95397 391 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 NR3C2P08235 984 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 RXRAP19793 462 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 CYP2C18P33260 490 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 MCM5P33992 734 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 FPGSQ05932 587 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 SART3Q15020 963 aaKnown RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 ADCK5Q3MIX3 580 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 FAM109BQ6ICB4 259 aaPredicted RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 CATIPQ7Z7H3 387 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 CMTR1Q8N1G2 835 aaKnown RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 SRBD1Q8N5C6 995 aaKnown RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.79■□□□□ 0.762e-6■■■■□ 23.3
BRCC3-202ENST00000340647 COL25A1Q9BXS0 654 aaPredicted RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 PPP1R12CQ9BZL4 782 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 ALDH8A1Q9H2A2 487 aaPredicted RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 DDX41Q9UJV9 622 aaKnown RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 TET1Q8NFU7 2136 aa19.79■□□□□ 0.76
BRCC3-202ENST00000340647 SPTBN5Q9NRC6 3674 aaKnown RBP19.79■□□□□ 0.76
BRCC3-202ENST00000340647 RBAK-RBAKDNI3L0D1 243 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 ZEB2O60315 1214 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 DDAH1O94760 285 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 MYL3P08590 195 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 CSF2RAP15509 400 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 LIFRP42702 1097 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 EXOSC10Q01780 885 aaKnown RBP19.78■□□□□ 0.76
BRCC3-202ENST00000340647 TTLL4Q14679 1199 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 STXBP2Q15833 593 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 TMEM240Q5SV17 173 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 RASIP1Q5U651 963 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 ARHGEF16Q5VV41 709 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 VSIG10LQ86VR7 867 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 RAB11FIP4Q86YS3 637 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 PIBF1Q8WXW3 757 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 ZFP91Q96JP5 570 aaPredicted RBP19.78■□□□□ 0.76
BRCC3-202ENST00000340647 TMEM87BQ96K49 555 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 NOC4LQ9BVI4 516 aaKnown RBP19.78■□□□□ 0.76
BRCC3-202ENST00000340647 SPZ1Q9BXG8 430 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 WNT8AQ9H1J5 351 aa19.78■□□□□ 0.76
BRCC3-202ENST00000340647 TRMT13Q9NUP7 481 aaKnown RBP19.78■□□□□ 0.76
BRCC3-202ENST00000340647 CPT1AP50416 773 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms