RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 TEKT3Q9BXF9 490 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-202ENST00000336057 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 PPIP5K2O43314 1243 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 KRT15P19012 456 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 RNF14Q9UBS8 474 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 PSMD2Q13200 908 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 FAM102BQ5T8I3 360 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 HHATQ5VTY9 493 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 SHC4Q6S5L8 630 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 CACNA2D3Q8IZS8 1091 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 ZNF609O15014 1411 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 HGSO14964 777 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-202ENST00000336057 HEXIM1O94992 359 aaKnown RBP17.24■□□□□ 0.35
HDAC5-202ENST00000336057 CASP1P29466 404 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-202ENST00000336057 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
HDAC5-202ENST00000336057 ADAT2Q7Z6V5 191 aaKnown RBP17.24■□□□□ 0.35
HDAC5-202ENST00000336057 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CD19P15391 556 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 SCARF1Q14162 830 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 KCTD1Q719H9 257 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 ENAHQ8N8S7 591 aaPredicted RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 HOMER3Q9NSC5 361 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 C2orf54Q08AI8 447 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 PFKFB3Q16875 520 aaPredicted RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CDAN1Q8IWY9 1227 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 MOCS3O95396 460 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 LMNB1P20700 586 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 SF3A3Q12874 501 aaKnown RBP eCLIP17.23■□□□□ 0.351e-9■■■□□ 14.9
HDAC5-202ENST00000336057 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CASP8Q14790 479 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 SEPT2Q15019 361 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 PPFIBP2Q8ND30 876 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 EPB41L5Q9HCM4 733 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 ABCB6Q9NP58 842 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 CAPN7Q9Y6W3 813 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 SLC16A2P36021 539 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 PPM1KQ8N3J5 372 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
HDAC5-202ENST00000336057 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
HDAC5-202ENST00000336057 TRIM37O94972 964 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 LRRC63Q05C16 580 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 CXCR5P32302 372 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 KIF11P52732 1056 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 IQCB1Q15051 598 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 XKR9Q5GH70 373 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 PCDHA13Q9Y5I0 950 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 GSG1L2A8MUP6 293 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 NDC80O14777 642 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 BBOX1O75936 387 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 NAA25Q14CX7 972 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 NAA35Q5VZE5 725 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-202ENST00000336057 STMN2Q93045 179 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-202ENST00000336057 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
HDAC5-202ENST00000336057 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 ALAS1P13196 640 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 GAP43P17677 238 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 CCT5P48643 541 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
HDAC5-202ENST00000336057 POLD1P28340 1107 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 NAA30Q147X3 362 aaPredicted RBP17.21■□□□□ 0.35
HDAC5-202ENST00000336057 GKAP1Q5VSY0 366 aaPredicted RBP17.21■□□□□ 0.35
HDAC5-202ENST00000336057 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 MGARPQ8TDB4 240 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 STX2P32856 288 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
HDAC5-202ENST00000336057 CDK8P49336 464 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 PDE6CP51160 858 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 KCNQ4P56696 695 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 TERF2Q15554 542 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 ANKRD42Q8N9B4 389 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 KANSL2Q9H9L4 492 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 CFAP157Q5JU67 520 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 FAM133AQ8N9E0 248 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 GRK7Q8WTQ7 553 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 CCDC127Q96BQ5 260 aa17.21■□□□□ 0.35
HDAC5-202ENST00000336057 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms