RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ARHGEF16Q5VV41 709 aa31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 SCFD2Q8WU76 684 aa31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 PIBF1Q8WXW3 757 aa31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 SEC63Q9UGP8 760 aaKnown RBP31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 BAZ2BQ9UIF8 2168 aaKnown RBP31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 BMP8BP34820 402 aa31.97■■■□□ 2.71
ATPAF1-201ENST00000329231 BEX3Q00994 111 aa31.97■■■□□ 2.71
ATPAF1-201ENST00000329231 FANCBQ8NB91 859 aa31.97■■■□□ 2.71
ATPAF1-201ENST00000329231 VTI1AQ96AJ9 217 aa31.97■■■□□ 2.71
ATPAF1-201ENST00000329231 A0A1W2PPC1 479 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 NKRFO15226 690 aaKnown RBP eCLIP31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 PLEKHA8P1O95397 391 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 TLE2Q04725 743 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 PPP2R5BQ15173 497 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 STXBP2Q15833 593 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 TMEM63BQ5T3F8 832 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 MICU3Q86XE3 530 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 TCEANC2Q96MN5 208 aa31.96■■■□□ 2.71
ATPAF1-201ENST00000329231 GCOM1H8Y6P7 765 aaPredicted RBP31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 EPB41L2O43491 1005 aaKnown RBP31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 POLR2MP0CAP2 368 aa31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 RAB11FIP4Q86YS3 637 aa31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 SRBD1Q8N5C6 995 aaKnown RBP31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 LBHD1Q9BQE6 289 aaPredicted RBP31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 PXMP2Q9NR77 195 aa31.95■■■□□ 2.71
ATPAF1-201ENST00000329231 CABYRO75952 493 aa31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 EIF2AK2P19525 551 aaKnown RBP31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 PTGS1P23219 599 aa31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 APOA5Q6Q788 366 aa31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 PRDM5Q9NQX1 630 aaPredicted RBP31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 SNX14Q9Y5W7 946 aa31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 DNAH12Q6ZR08 3092 aa31.94■■■□□ 2.7
ATPAF1-201ENST00000329231 A0A0U1RQG5 324 aaPredicted RBP31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 PQBP1O60828 265 aaKnown RBP31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 HOXA13P31271 388 aaPredicted RBP31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 FGD1P98174 961 aa31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 TTLL4Q14679 1199 aa31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 JAKMIP1Q96N16 626 aaKnown RBP31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 TOX2Q96NM4 488 aa31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 PDLIM7Q9NR12 457 aa31.93■■■□□ 2.7
ATPAF1-201ENST00000329231 NR3C2P08235 984 aa31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 MDM2Q00987 491 aaPredicted RBP31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 TMTC3Q6ZXV5 915 aa31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 ANKRD33Q7Z3H0 272 aa31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 CMTR1Q8N1G2 835 aaKnown RBP31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 RBM28Q9NW13 759 aaKnown RBP31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 MROH7Q68CQ1 1323 aa31.92■■■□□ 2.7
ATPAF1-201ENST00000329231 DCDC2CA8MYV0 355 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 EIF3JO75822 258 aaKnown RBP31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 CLTBP09497 229 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 TXNP10599 105 aaKnown RBP31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 BLOC1S2Q6QNY1 142 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 CXCL17Q6UXB2 119 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 SEPT14Q6ZU15 432 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 OR6J1Q8NGC5 347 aa31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 UBE2OQ9C0C9 1292 aaKnown RBP31.91■■■□□ 2.7
ATPAF1-201ENST00000329231 TRIOBPQ9H2D6 2365 aa31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 ZBTB43O43298 467 aa31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 CPT1AP50416 773 aa31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 BRDTQ58F21 947 aaPredicted RBP31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 PDCD2LQ9BRP1 358 aa31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 BRPF3Q9ULD4 1205 aa31.9■■■□□ 2.7
ATPAF1-201ENST00000329231 ARVCFO00192 962 aa31.89■■■□□ 2.7
ATPAF1-201ENST00000329231 PSMA5P28066 241 aa31.89■■■□□ 2.7
ATPAF1-201ENST00000329231 CDK7P50613 346 aa31.89■■■□□ 2.7
ATPAF1-201ENST00000329231 FCHSD1Q86WN1 690 aa31.89■■■□□ 2.7
ATPAF1-201ENST00000329231 CCDC82Q8N4S0 544 aa31.89■■■□□ 2.7
ATPAF1-201ENST00000329231 KLF18A0A0U1RQI7 1052 aa31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 FXR1P51114 621 aaKnown RBP eCLIP31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 RTN1Q16799 776 aa31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 SH3RF1Q7Z6J0 888 aa31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 POLR3EQ9NVU0 708 aa31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 PCDH10Q9P2E7 1040 aa31.88■■■□□ 2.69
ATPAF1-201ENST00000329231 TRIM43BA6NCK2 446 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 ARIH2O95376 493 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 CPA1P15085 419 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 RCAN1P53805 252 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 PGM5Q15124 567 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 CCDC62Q6P9F0 684 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 CUL5Q93034 780 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 TRIM43Q96BQ3 446 aaPredicted RBP31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 SEZ6LQ9BYH1 1024 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 TMEM39AQ9NV64 488 aa31.87■■■□□ 2.69
ATPAF1-201ENST00000329231 MYCLP12524 364 aaPredicted RBP31.86■■■□□ 2.69
ATPAF1-201ENST00000329231 FAAP100Q0VG06 881 aa31.86■■■□□ 2.69
ATPAF1-201ENST00000329231 Q6ZUG5 572 aa31.86■■■□□ 2.69
ATPAF1-201ENST00000329231 COPS5Q92905 334 aa31.86■■■□□ 2.69
ATPAF1-201ENST00000329231 GOLGA8AA7E2F4 631 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 GOLGA8BA8MQT2 603 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 KIAA0355O15063 1070 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 ITGA7Q13683 1181 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 VSIG10LQ86VR7 867 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 SMARCC2Q8TAQ2 1214 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 USP26Q9BXU7 913 aa31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 NAP1L2Q9ULW6 460 aaPredicted RBP31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 RANBP2P49792 3224 aaKnown RBP31.85■■■□□ 2.69
ATPAF1-201ENST00000329231 KPNA6O60684 536 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 RPS6KB1P23443 525 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 CCND2P30279 289 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 TDHQ8IZJ6 230 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms