RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 IVLP07476 585 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 LDHCP07864 332 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 MYBL2P10244 700 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 IDEP14735 1019 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 HOXA7P31268 230 aaPredicted RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 TECP42680 631 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 FXR2P51116 673 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLK1-201ENST00000321356 EHHADHQ08426 723 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 VWA3BQ502W6 1294 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 IQCEQ6IPM2 695 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 CCNI2Q6ZMN8 369 aaPredicted RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 UNC13DQ70J99 1090 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 CREG2Q8IUH2 290 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 MMGT1Q8N4V1 131 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 ZNF713Q8N859 430 aaPredicted RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 TBCKQ8TEA7 893 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 CALML4Q96GE6 196 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 EYA3Q99504 573 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 NDST4Q9H3R1 872 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 SH2D4AQ9H788 454 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 FAM204AQ9H8W3 233 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 FEZ2Q9UHY8 353 aaPredicted RBP9.69□□□□□ -0.86
CLK1-201ENST00000321356 JRKLQ9Y4A0 524 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 MACROD2A1Z1Q3 448 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 MYMKA6NI61 221 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 EPHB6O15197 1021 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 CDK8P49336 464 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 KCNQ4P56696 695 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SPA17Q15506 151 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SV2BQ7L1I2 683 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 KRT26Q7Z3Y9 468 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 MAPKAPK5Q8IW41 473 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 AENQ8WTP8 325 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 HPS3Q969F9 1004 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 PNMA5Q96PV4 448 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 RIOX1Q9H6W3 641 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 LRWD1Q9UFC0 647 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SAP30BPQ9UHR5 308 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 PLIN4Q96Q06 1357 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 GPR75-ASB3A0A0A6YYF3 556 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 PJA2O43164 708 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 EDIL3O43854 480 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 PHACTR2O75167 634 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 TACC1O75410 805 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 KIF11P52732 1056 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 LRRC63Q05C16 580 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SOGA3Q5TF21 947 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 LRRC55Q6ZSA7 311 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 ARHGAP27Q6ZUM4 889 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 ZNF804AQ7Z570 1209 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SRLQ86TD4 932 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 CAGE1Q8TC20 777 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 BAP1Q92560 729 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 PIGSQ96S52 555 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SELENOOQ9BVL4 669 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 IFIH1Q9BYX4 1025 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 EDEM3Q9BZQ6 932 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SLC39A2Q9NP94 309 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 JADE2Q9NQC1 790 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 SEC63Q9UGP8 760 aaKnown RBP9.68□□□□□ -0.86
CLK1-201ENST00000321356 MTMR7Q9Y216 660 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 PCDHA13Q9Y5I0 950 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 CAPN6Q9Y6Q1 641 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 MYH10P35580 1976 aa9.68□□□□□ -0.86
CLK1-201ENST00000321356 BTAF1O14981 1849 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 AGPSO00116 658 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 ZPR1O75312 459 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 FGFR1OPO95684 399 aaKnown RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 EIF4A3P38919 411 aaKnown RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 BTDP43251 543 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 TNNT3P45378 269 aaPredicted RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 GRAPQ13588 217 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 PDIA5Q14554 519 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 ASTE1Q2TB18 679 aaPredicted RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 LRRC31Q6UY01 552 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 SLC51AQ86UW1 340 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 C2CD5Q86YS7 1000 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 GRAPLQ8TC17 118 aaPredicted RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 LARP4BQ92615 738 aaKnown RBP9.67□□□□□ -0.86
CLK1-201ENST00000321356 CEP95Q96GE4 821 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 TRERF1Q96PN7 1200 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 LCMT1Q9UIC8 334 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 FAM184BQ9ULE4 1060 aa9.67□□□□□ -0.86
CLK1-201ENST00000321356 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 ATAD5Q96QE3 1844 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 MYO1CO00159 1063 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 ZMYND10O75800 440 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms