RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.47
CHFR-201ENST00000266880 PNMA6AP0CW24 399 aaPredicted RBP12.08□□□□□ -0.47
CHFR-201ENST00000266880 KRT40Q6A162 431 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 FANCLQ9NW38 375 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 RHBDL2Q9NX52 303 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 STAT2P52630 851 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 TBCCQ15814 346 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 ICA1LQ8NDH6 482 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 FNDC3AQ9Y2H6 1198 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 KRT7P08729 469 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 MRPS25P82663 173 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 SZRD1Q7Z422 152 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 PLAAQ9Y263 795 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 DAPK1P53355 1430 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 USP28Q96RU2 1077 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 KIF9Q9HAQ2 790 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 CAND2O75155 1236 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 KRT8P05787 483 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 PIK3CAP42336 1068 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 CEP55Q53EZ4 464 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 ELAC2Q9BQ52 826 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 CAPN9O14815 690 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 GFM2Q969S9 779 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 SRGAP2BP0DMP2 458 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 RAD23BP54727 409 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
CHFR-201ENST00000266880 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
CHFR-201ENST00000266880 PEX14O75381 377 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ARHGEF18Q6ZSZ5 1173 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 PHLPP2Q6ZVD8 1323 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ASXL1Q8IXJ9 1541 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 RPN1P04843 607 aaKnown RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ARMT1Q9H993 441 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 CAPRIN1Q14444 709 aaKnown RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 HADHQ16836 314 aaKnown RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 DONSONQ9NYP3 566 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 A6NJR5 290 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 UBN1Q9NPG3 1134 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 MRGBPQ9NV56 204 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 HACD3Q9P035 362 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 CHUKO15111 745 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 KRT25Q7Z3Z0 450 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ADCK1Q86TW2 530 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 CRLF3Q8IUI8 442 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 KIAA0825Q8IV33 1275 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ZNF653Q96CK0 615 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 NUMA1Q14980 2115 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 DEPDC1Q5TB30 811 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 USP33Q8TEY7 942 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ZSCAN32Q9NX65 697 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ITM2BQ9Y287 266 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 K7ENM7 598 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
CHFR-201ENST00000266880 PDCLQ13371 301 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 DIABLOQ9NR28 239 aa12.07□□□□□ -0.48
CHFR-201ENST00000266880 ECEL1O95672 775 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 PARD6BQ9BYG5 372 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 SCG2P13521 617 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 FBXO38Q6PIJ6 1188 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 RFX8Q6ZV50 586 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 NUDCD1Q96RS6 583 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 MMS19Q96T76 1030 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 TRIM8Q9BZR9 551 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 VPS54Q9P1Q0 977 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms