RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 BMP2KQ9NSY1 1161 aaPredicted RBP17.88■□□□□ 0.45
GPC1-201ENST00000264039 MCM8Q9UJA3 840 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 FCER1AP12319 257 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 NBPF9Q3BBW0 867 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 THEMIS2Q5TEJ8 643 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 PARD3BQ8TEW8 1205 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 CASKIN2Q8WXE0 1202 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 LSM14BQ9BX40 385 aaKnown RBP17.88■□□□□ 0.45
GPC1-201ENST00000264039 CEP170BQ9Y4F5 1589 aaPredicted RBP17.88■□□□□ 0.45
GPC1-201ENST00000264039 ADD2P35612 726 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 DCAF17Q5H9S7 520 aaPredicted RBP17.88■□□□□ 0.45
GPC1-201ENST00000264039 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 LMNTD2Q8IXW0 634 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 GDAP1Q8TB36 358 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 CUL5Q93034 780 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 P2RX5Q93086 422 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 TSC22D3Q99576 134 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 TRIM37O94972 964 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 LTKP29376 864 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 TECP42680 631 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 QPCTQ16769 361 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 DENND2CQ68D51 928 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 FAM47EQ6ZV65 393 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 FAM133AQ8N9E0 248 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 ZNF579Q8NAF0 562 aaKnown RBP17.87■□□□□ 0.45
GPC1-201ENST00000264039 WHAMMQ8TF30 809 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 DNAJC17Q9NVM6 304 aaKnown RBP17.87■□□□□ 0.45
GPC1-201ENST00000264039 XDHP47989 1333 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 ANKRD62A6NC57 917 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 SNX1Q13596 522 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 MMGT1Q8N4V1 131 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 RAPGEF5Q92565 580 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 LEMD3Q9Y2U8 911 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 SOS2Q07890 1332 aaPredicted RBP17.87■□□□□ 0.45
GPC1-201ENST00000264039 ITIH6Q6UXX5 1313 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 KCNA6P17658 529 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 CCDC84Q86UT8 332 aaPredicted RBP17.87■□□□□ 0.45
GPC1-201ENST00000264039 VPS36Q86VN1 386 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 LMBR1Q8WVP7 490 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 SH3GL3Q99963 347 aa17.87■□□□□ 0.45
GPC1-201ENST00000264039 A0A1W2PRG0 241 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 DNM1LO00429 736 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 SHOX2O60902 331 aaPredicted RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 CABP7Q86V35 215 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 NKX2-3Q8TAU0 364 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 IFT74Q96LB3 600 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 LRRD1A4D1F6 860 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 SEPT7Q16181 437 aaKnown RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 WDR59Q6PJI9 974 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 INTS8Q75QN2 995 aaKnown RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 PRCCQ92733 491 aaPredicted RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 SH3GL2Q99962 352 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 NDST4Q9H3R1 872 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 SLC5A1P13866 664 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 NUGGCQ68CJ6 796 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 LONP2Q86WA8 852 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 CHMP6Q96FZ7 201 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 SH2D4AQ9H788 454 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 ARPP21Q9UBL0 812 aaPredicted RBP17.86■□□□□ 0.45
GPC1-201ENST00000264039 SERPINA10Q9UK55 444 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
GPC1-201ENST00000264039 SPDYE3A6NKU9 549 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 IGHMBP2P38935 993 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 RANBP1P43487 201 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 ANKRD20A8PQ5CZ79 823 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 HOOK3Q86VS8 718 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 MKNK2Q9HBH9 465 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 DLG5Q8TDM6 1919 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 HSD17B3P37058 310 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 ANKRD40Q6AI12 368 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 TRMT1LQ7Z2T5 733 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 MSL3Q8N5Y2 521 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 RETREG2Q8NC44 543 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 CELF4Q9BZC1 486 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.451e-7■■■■■ 115.4
GPC1-201ENST00000264039 VPS41P49754 854 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 NTRK3Q16288 839 aa17.85■□□□□ 0.45
GPC1-201ENST00000264039 ARHGEF2Q92974 986 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 DDX23Q9BUQ8 820 aaKnown RBP17.85■□□□□ 0.45
GPC1-201ENST00000264039 MUM1Q2TAK8 710 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 ZCWPW1Q9H0M4 648 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 TAF1DQ9H5J8 278 aaPredicted RBP17.84■□□□□ 0.45
GPC1-201ENST00000264039 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
GPC1-201ENST00000264039 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 COPB2P35606 906 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
GPC1-201ENST00000264039 MTMR8Q96EF0 704 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 PSMD1Q99460 953 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 TBK1Q9UHD2 729 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 LIFRP42702 1097 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 MTMR3Q13615 1198 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 ASIC2Q16515 512 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 ZNF449Q6P9G9 518 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 SLC17A8Q8NDX2 589 aa17.84■□□□□ 0.45
GPC1-201ENST00000264039 TSKSQ9UJT2 592 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms