RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF658Q5TYW1 1059 aaPredicted RBP20.76■□□□□ 0.91
PTPRE-201ENST00000254667 DPP9Q86TI2 863 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 VPS37BQ9H9H4 285 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 ZNF277Q9NRM2 450 aaPredicted RBP20.76■□□□□ 0.91
PTPRE-201ENST00000254667 SH3BP5O60239 455 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 CCND2P30279 289 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 NECTIN1Q15223 517 aa20.76■□□□□ 0.91
PTPRE-201ENST00000254667 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 TBC1D8O95759 1140 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 NR2F2P24468 414 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 PHBP35232 272 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 KRT71Q3SY84 523 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
PTPRE-201ENST00000254667 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
PTPRE-201ENST00000254667 GBP1P32455 592 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 TRIM11Q96F44 468 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 USP17L8P0C7I0 530 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 ADRA2BP18089 450 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 PIK3CAP42336 1068 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 SLC12A2P55011 1212 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 IRX5P78411 483 aaPredicted RBP20.75■□□□□ 0.91
PTPRE-201ENST00000254667 ARMC9Q7Z3E5 817 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 BBOF1Q8ND07 529 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 FAM193BQ96PV7 902 aaPredicted RBP20.75■□□□□ 0.91
PTPRE-201ENST00000254667 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 RUNDC3BQ96NL0 473 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 NARFQ9UHQ1 456 aa20.75■□□□□ 0.91
PTPRE-201ENST00000254667 PPFIA4O75335 1185 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 RSPH3Q86UC2 560 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 SH3GLB2Q9NR46 395 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 FKBP3Q00688 224 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 PSMD2Q13200 908 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 RASGRP4Q8TDF6 673 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 ANKFY1Q9P2R3 1169 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 TPD52P55327 224 aaPredicted RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 TYW1Q9NV66 732 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 TLR3O15455 904 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 RNF8O76064 485 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 DALRD3Q5D0E6 543 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 CIAPIN1Q6FI81 312 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 STRBPQ96SI9 672 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 PNMA6FA0A0J9YX94 578 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 CNGA1P29973 690 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 CDK8P49336 464 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 MAN2A1Q16706 1144 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 ARL6IP4Q66PJ3 421 aaKnown RBP20.74■□□□□ 0.91
PTPRE-201ENST00000254667 CEP57Q86XR8 500 aa20.74■□□□□ 0.91
PTPRE-201ENST00000254667 TTLL6Q8N841 843 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 AFPP02771 609 aaKnown RBP20.73■□□□□ 0.91
PTPRE-201ENST00000254667 PPP2R5DQ14738 602 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 RFX7Q2KHR2 1363 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 SLC16A2P36021 539 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 ATP11AP98196 1134 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 PALM2Q8IXS6 379 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 ARHGAP24Q8N264 748 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 TSC1Q92574 1164 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 EFCAB8A8MWE9 144 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 ZNF500O60304 480 aaPredicted RBP20.73■□□□□ 0.91
PTPRE-201ENST00000254667 SORBS3O60504 671 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 SCYL2Q6P3W7 929 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
PTPRE-201ENST00000254667 DIXDC1Q155Q3 683 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 TTC31Q49AM3 519 aaPredicted RBP20.72■□□□□ 0.91
PTPRE-201ENST00000254667 CCDC62Q6P9F0 684 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 FAM186BQ8IYM0 893 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 IFNB1P01574 187 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 RRAGDQ9NQL2 400 aaPredicted RBP20.72■□□□□ 0.91
PTPRE-201ENST00000254667 KMT5AQ9NQR1 393 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 MYO3BQ8WXR4 1341 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 GSDMBQ8TAX9 411 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 RGS16O15492 202 aaPredicted RBP20.72■□□□□ 0.91
PTPRE-201ENST00000254667 GABPB1Q06547 395 aaPredicted RBP20.72■□□□□ 0.91
PTPRE-201ENST00000254667 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
PTPRE-201ENST00000254667 NEDD9Q14511 834 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 ZBTB9Q96C00 473 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 KRT12Q99456 494 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 IFT122Q9HBG6 1241 aa20.72■□□□□ 0.91
PTPRE-201ENST00000254667 BUB1O43683 1085 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 RAD17O75943 681 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 ADCY8P40145 1251 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 MCAMP43121 646 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 MAP7D3Q8IWC1 876 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 ANKRD36BP1Q96IX9 119 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 RPS6KC1Q96S38 1066 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 TTLL3Q9Y4R7 772 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 CTNNA1P35221 906 aaKnown RBP20.71■□□□□ 0.91
PTPRE-201ENST00000254667 ALCAMQ13740 583 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 KMT5BQ4FZB7 885 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 USP17L2Q6R6M4 530 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 VSIG1Q86XK7 387 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 DYNLL2Q96FJ2 89 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 MTA3Q9BTC8 594 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 OVOS2A0A0G2JMS6 1433 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms