RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NAA35Q5VZE5 725 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 KCTD16Q68DU8 428 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 ZNF384Q8TF68 577 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 RNF14Q9UBS8 474 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 NCK2O43639 380 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 GLI1P08151 1106 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 IGHMBP2P38935 993 aaKnown RBP15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 CFAP58Q5T655 872 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 KLHDC7AQ5VTJ3 777 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 RASGRP4Q8TDF6 673 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 PIK3R5Q8WYR1 880 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC43Q96MW1 224 aaKnown RBP15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 C7orf25Q9BPX7 421 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 ZNF804BA4D1E1 1349 aa15.51■□□□□ 0.07
SCNN1A-201ENST00000228916 LAD1O00515 517 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 AKR1B10O60218 316 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 PRPHP41219 470 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 CARSP49589 748 aaKnown RBP15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 ASTE1Q2TB18 679 aaPredicted RBP15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 MICALCLQ6ZW33 695 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 TSKSQ9UJT2 592 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 MYH1P12882 1939 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 MYO1FO00160 1098 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM153BP0C7A2 387 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 PLCG1P19174 1290 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 MAGEA1P43355 309 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 PAK2Q13177 524 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM153CQ494X1 144 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 CFAP221Q4G0U5 840 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 VWA3BQ502W6 1294 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 RNF10Q8N5U6 811 aaKnown RBP15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 GPATCH11Q8N954 259 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 MTMR8Q96EF0 704 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM153AQ9UHL3 310 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 SRRM3A6NNA2 597 aaPredicted RBP15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 PPP1R37O75864 691 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC178Q5BJE1 867 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 GGA2Q9UJY4 613 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 NFU1Q9UMS0 254 aa15.5■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC194A0A1B0GVG4 234 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 USP17L12C9JPN9 530 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 USP17L21D6R901 530 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 FCER1AP12319 257 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 NR1D1P20393 614 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 KIF5BP33176 963 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 MAP2K2P36507 400 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 PTGISQ16647 500 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 CENPPQ6IPU0 288 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 ZNF473Q8WTR7 871 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 BAP1Q92560 729 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 GPKOWQ92917 476 aaPredicted RBP eCLIP15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 NDST4Q9H3R1 872 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM207AQ9NSI2 230 aaPredicted RBP15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 PHLPP1O60346 1717 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 KIAA0895Q8NCT3 520 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 MS4A14Q96JA4 679 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 AK8Q96MA6 479 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 CXorf56Q9H5V9 222 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 PCDHA6Q9UN73 950 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 PCDHA8Q9Y5H6 950 aa15.49■□□□□ 0.07
SCNN1A-201ENST00000228916 ABCB11O95342 1321 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 RCSD1Q6JBY9 416 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 CCDC84Q86UT8 332 aaPredicted RBP15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 CABP7Q86V35 215 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 DAGLBQ8NCG7 672 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 BTG4Q9NY30 223 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 H0YHG0 523 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 HEXIM1O94992 359 aaKnown RBP15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 ASIC1P78348 528 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 RPAINQ86UA6 219 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 EPB41L5Q9HCM4 733 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 SSU72P8A0A1W2PR75 194 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 INF2Q27J81 1249 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 MYCBPAPQ8TBZ2 947 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 ATP6V1G3Q96LB4 118 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
SCNN1A-201ENST00000228916 ZSCAN5CA6NGD5 496 aaPredicted RBP15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 MDH1P40925 334 aaKnown RBP15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 MAN2A1Q16706 1144 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 CNNM4Q6P4Q7 775 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 RRAGAQ7L523 313 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 ANKRD13CQ8N6S4 541 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 CCT8L2Q96SF2 557 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 TAF1P21675 1872 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 HMGB1P1B2RPK0 211 aaPredicted RBP15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 NTSR2O95665 410 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 GUCY2DQ02846 1103 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 PLCB4Q15147 1175 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 TXNRD1Q16881 649 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms