RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 CluhQ5SW19 1315 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Oog3Q3UWY1 500 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 CnstQ8CBC4 711 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Nova2D3YVV7 556 aaKnown RBP16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Usp17ldG5E8G2 545 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Usp17lcG5E8I7 545 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Man1a2P39098 641 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Sval3Q76I99 144 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Camkk2Q8C078 588 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ccdc105Q9D4K7 499 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Frmpd4A2AFR3 1320 aa16.26■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Cpb1B2RS76 415 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 H2afxP27661 143 aaKnown RBP16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 CtshP49935 333 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Arglu1Q3UL36 271 aaKnown RBP16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Gprin1Q3UNH4 932 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Anks1bQ8BIZ1 1259 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Rab11fip4Q8BQP8 635 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Josd2Q9CR30 188 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Pkd2l2Q9JLG4 621 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 AmfrQ9R049 643 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Plxnb2B2RXS4 1842 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Hoxa11P31311 313 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Setd4P58467 439 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ubxn2bQ0KL01 331 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ddx19bQ8BZY3 494 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Trim9Q8C7M3 817 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Arl8aQ8VEH3 186 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 BaatQ91X34 420 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Pcdha7Q91Y13 937 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Fam205a1D3YZF6 1314 aa16.25■□□□□ 0.19
Rnf4-207ENSMUST00000182709 AW822073A0A0N4SUK1 652 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Wdr3Q8BHB4 942 aaKnown RBP16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Exoc1Q8R3S6 894 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Eps8l1Q8R5F8 716 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Desi2Q9D291 194 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 SmapQ9R0P4 181 aaKnown RBP16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Lamb1P02469 1786 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Parp1P11103 1013 aaKnown RBP16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Xxylt1Q3U4G3 392 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Dennd2aQ8C4S8 1000 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Coa7Q921H9 231 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Mfap3Q922T2 349 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Pdcd6ipQ9WU78 869 aaKnown RBP16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 SynrgQ5SV85 1306 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Gm7168A0AUV4 508 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Cyp2c68K7N6C2 491 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Zfp953Q3UPV7 304 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Panx2Q6IMP4 677 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Glis2Q8VDL9 521 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ears2Q9CXJ1 523 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Q9D5Q8 446 aa16.24■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Psmc6P62334 389 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Psmb7P70195 277 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ccdc102aQ3TMW1 549 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ica1lQ3TY65 431 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Vil1Q62468 827 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 IgflQ6B9Z0 140 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Dnph1Q80VJ3 173 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Gprasp2Q8BUY8 826 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Gmcl1Q920G9 524 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Cfap45Q9D9U9 551 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Arl6ip4Q9JM93 229 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Uchl5Q9WUP7 329 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Frmpd3A0A140LIW3 1774 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 4932429P05RikA2ADI4 785 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Actn3O88990 900 aaKnown RBP16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Adam6bQ6IMH7 756 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Fam161bQ8CB59 589 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Bcas3Q8CCN5 928 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ints4Q8CIM8 964 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Vps18Q8R307 973 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Glrx3Q9CQM9 337 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 MymkQ9D1N4 221 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Tbx18Q9EPZ6 613 aa16.23■□□□□ 0.19
Rnf4-207ENSMUST00000182709 LdhbP16125 334 aaKnown RBP16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Sox5P35710 763 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Bace1P56818 501 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Psmd1Q3TXS7 953 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Mcm7Q61881 719 aaKnown RBP16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Mns1Q61884 491 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Lrrcc1Q69ZB0 1026 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Adgrg6Q6F3F9 1165 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ccdc189Q6NZQ0 333 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Trak2Q6P9N8 913 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Rasal3Q8C2K5 1041 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Mtmr6Q8VE11 617 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 AacsQ9D2R0 672 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ppil2Q9D787 521 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Scgb2b18A0A087WPA9 112 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Herc3A6H6S0 1050 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Ccdc78D3Z5T1 437 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Flot1O08917 428 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Prl2c3P04768 224 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Sema3eP70275 775 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Specc1lQ2KN98 1118 aaKnown RBP16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Lamb3Q61087 1168 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Kdm1aQ6ZQ88 853 aa16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Pgrmc2Q80UU9 217 aaKnown RBP16.22■□□□□ 0.19
Rnf4-207ENSMUST00000182709 Igdcc3Q8BQC3 813 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms