RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Haus4Q8BFT2 363 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Spats2Q8K1N4 545 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Bcl11bQ99PV8 884 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Zfyve9A2A8R0 1397 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gm30191A0A0U1RNT7 187 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Dnai2A2AC93 623 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Otud7bB2RUR8 840 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gm1758F6VZZ1 202 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 DnttP09838 530 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 PtgdrP70263 357 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Galnt17Q7TT15 598 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 SyncQ9EPM5 470 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Fxr2Q9WVR4 673 aaKnown RBP14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Sh3tc1G3X9F6 1346 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Togaram1Q6A070 1776 aaKnown RBP14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 EvplQ9D952 2035 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ppfia4B8QI36 1187 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Lig1P37913 916 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Lca5Q80ST9 704 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Igdcc3Q8BQC3 813 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ubxn6Q99PL6 442 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Psrc1Q9D0P7 329 aa14.32□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ltbp2O08999 1813 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Apol6B7ZC55 329 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Rsbn1lD3Z0K6 821 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Akap2O54931 893 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 EgfrQ01279 1210 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Pnma5Q5DTT8 618 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Zrsr2Q62377 462 aaKnown RBP14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Arhgef19Q8BWA8 802 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 SltmQ8CH25 1031 aaKnown RBP14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Kctd10Q922M3 315 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Dnajc19Q9CQV7 116 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 MybP06876 636 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Trim43aQ3TL54 445 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ppp1r7Q3UM45 361 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Shc3Q61120 474 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Tsg101Q61187 391 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Armcx3Q8BHS6 379 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ubxn1Q922Y1 297 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 AacsQ9D2R0 672 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Calr3Q9D9Q6 380 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Trmt112Q9DCG9 125 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Slfn1Q9Z0I7 337 aa14.31□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gm7168A0AUV4 508 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Odf2A3KGV1 830 aaKnown RBP14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Lilrb3P97484 841 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 NntQ61941 1086 aaKnown RBP14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Arid3aQ62431 601 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Krt87Q6IMF0 495 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ankrd24Q80VM7 985 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Cc2d1bQ8BRN9 848 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Matr3Q8K310 846 aaKnown RBP14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Dnajc17Q91WT4 303 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ccdc105Q9D4K7 499 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Rwdd2aQ9D9S3 292 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Akap8Q9DBR0 687 aaKnown RBP14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gm5114W4VSN8 858 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Zfp831A2ADM8 1628 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 ErmardE9Q048 622 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 A430078G23RikE9Q7Y4 484 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Aknad1E9Q8N6 675 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Wee1P47810 646 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Secisbp2lQ6A098 1086 aaKnown RBP14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Usp27Q8CEG8 438 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Kbtbd4Q8R179 534 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Krt34Q9D646 392 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Mkrn1Q9QXP6 481 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Slc26a4Q9R155 780 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ppp2r3dQ9Z176 491 aa14.3□□□□□ -0.12
Nup88-203ENSMUST00000108531 Cacna1sQ02789 1880 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 VirmaA2AIV2 1811 aaKnown RBP14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Nup188Q6ZQH8 1759 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Map7d1A2AJI0 846 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ankrd35E9Q9D8 996 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ankrd13cQ3UX43 541 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Bbof1Q3V079 533 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 EregQ61521 162 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ccdc148Q6P5U8 527 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Mx1P09922 631 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 NfixP70257 488 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Surf6P70279 355 aaKnown RBP14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gdf10P97737 476 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Znf827Q505G8 1078 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Lrrc41Q8K1C9 807 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Psmd2Q8VDM4 908 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Osbpl1aQ91XL9 950 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Kremen1Q99N43 473 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 CenphQ9QYM8 241 aa14.29□□□□□ -0.12
Nup88-203ENSMUST00000108531 Lrrc32G3XA59 663 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Stat4P42228 749 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 HmmrQ00547 794 aaKnown RBP14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Nlrx1Q3TL44 975 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Sco1Q5SUC9 284 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Cd37Q61470 281 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Bbs9Q811G0 885 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Snip1Q8BIZ6 383 aaKnown RBP14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Galntl5Q9D4M9 431 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Nlrp5Q9R1M5 1163 aa14.28□□□□□ -0.12
Nup88-203ENSMUST00000108531 Chd5A2A8L1 1946 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms