RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Dclk1Q9JLM8 756 aa8.4□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 PolkQ9QUG2 852 aa8.4□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Celf2Q9Z0H4 508 aaKnown RBP8.4□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ankrd31A0A140LI88 1765 aa8.4□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 HttP42859 3119 aa8.4□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Abcc4E9Q236 1325 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Mybbp1aQ7TPV4 1344 aaKnown RBP8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gfra2O08842 464 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Atp6v0a2P15920 856 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Map2k1P31938 393 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gpr3P35413 330 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Id3P41133 119 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Nbr1P97432 988 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gpatch11Q3UFS4 262 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ankrd13cQ3UX43 541 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Wdr93Q402B2 695 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Prune1Q8BIW1 454 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Sp8Q8BMJ8 486 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Strip1Q8C079 837 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Iffo2Q8R2V2 512 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tomm22Q9CPQ3 142 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tmem192Q9CXT7 266 aa8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 NgdnQ9DB96 315 aaKnown RBP8.39□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 NrapQ80XB4 1728 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Prss51A0A286YDY8 319 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Zmynd8A2A484 1235 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Nxpe3B9EKK6 559 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Elmsan1E9Q2I4 1089 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Dhx16G3X8X0 1044 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 SlkO54988 1233 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Cfdp1O88271 295 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Itgb7P26011 806 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 SgcbP82349 320 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Chrna5Q2MKA5 467 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ifit1bl2Q3U687 466 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Rnf43Q5NCP0 784 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Pcsk7Q61139 770 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ccdc93Q7TQK5 629 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Slitrk4Q810B8 837 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gtpbp10Q8K013 366 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Znf830Q8R1N0 363 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Top1mtQ8R4U6 593 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ccar2Q8VDP4 922 aaKnown RBP8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Taf5lQ91WQ5 589 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 GckrQ91X44 587 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Znf687Q9D2D7 1237 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ush1cQ9ES64 910 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Lancl2Q9JJK2 450 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Prr14lE9Q7C4 1971 aa8.38□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Kiaa0232Q80U59 1396 aaKnown RBP8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ect2lA0A140LIP2 953 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Npy5rO70342 466 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Becn1O88597 448 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 PtmaP26350 111 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Zap70P43404 618 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Syt1P46096 421 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Psmd1Q3TXS7 953 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Q66JV7 365 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Sgsm2Q80U12 1005 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ubxn10Q8BG34 277 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Jakmip1Q8BVL9 626 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Adgra1Q8C4G9 578 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 P3h4Q8K2B0 443 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Sf3a1Q8K4Z5 791 aaKnown RBP8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Cdpf1Q8R3A2 119 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Sirt2Q8VDQ8 389 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Rbm5Q91YE7 815 aaKnown RBP8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Med4Q9CQA5 270 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Q9D5Y0 588 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Slx4ipQ9D7Y9 413 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Bola1Q9D8S9 137 aaKnown RBP8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tnip1Q9WUU8 647 aa8.37□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ep400Q8CHI8 3072 aaKnown RBP8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Brca1P48754 1812 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Vsig10lD3YZF7 868 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Dctn1O08788 1281 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Wnt11P48615 354 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ube2hP62257 183 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gjb2Q00977 226 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Iqsec3Q3TES0 1195 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Fam228bQ497Q6 232 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 PogkQ80TC5 607 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Il17rcQ8K4C2 698 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 NeproQ8R2U2 564 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Pcdhb10Q91VE5 797 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Pcdhgc5Q91XW9 944 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Sec13Q9D1M0 322 aa8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Psma5Q9Z2U1 241 aaKnown RBP8.36□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Polr2aP08775 1970 aaKnown RBP8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Syngap1F6SEU4 1340 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Atp8b3Q6UQ17 1335 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Aknad1E9Q8N6 675 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 HunkO88866 714 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 AmhP27106 555 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Grm8P47743 908 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ccdc162pQ0VG85 912 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Cers3Q1A3B0 383 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tmem173Q3TBT3 378 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 GmpsQ3THK7 693 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Ifit2Q64112 472 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 104.2 ms