RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Rbm15bQ6PHZ5 887 aaKnown RBP19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Slc5a4aQ9ET37 656 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Med23Q80YQ2 1367 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ube4aE9Q735 1028 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Casp14O89094 257 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Trmt10cQ3UFY8 414 aaKnown RBP19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Mroh8E9PYI4 1049 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ass1P16460 412 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Xrcc6P23475 608 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Rtel1Q0VGM9 1203 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Mei1Q9D4I2 1268 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Calb1P12658 261 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Hoxc10P31257 342 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Cnot7Q60809 285 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ccdc17Q8CE13 565 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Olfr397Q8VEZ6 315 aa19.3■□□□□ 0.68
Sort1-201ENSMUST00000102632 Pde8bE9Q4S1 865 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Nsun7Q14AW5 724 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Zbtb17Q60821 794 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Tom1l1Q923U0 474 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ccdc103Q9D9P2 237 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Shroom2A2ALU4 1481 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 YwhagP61982 247 aaKnown RBP19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Nr2c1Q505F1 590 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 TdrkhQ80VL1 560 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Serpinb12Q9D7P9 423 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Krt71Q9R0H5 524 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Gm3402K7N5P2 326 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Spc25Q3UA16 226 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Bloc1s4Q8VED2 215 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Pdia6Q922R8 440 aaKnown RBP19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Vmp1Q99KU0 406 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Proca1B0QZF7 307 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Foxred2Q3USW5 665 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Q80ZQ3 298 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Frmd4aQ8BIE6 1020 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ftsj1Q8CBC7 324 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 D1Pas1P16381 660 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Pcsk1nQ9QXV0 258 aa19.29■□□□□ 0.68
Sort1-201ENSMUST00000102632 Hpcal4Q8BGZ1 191 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Sos2Q02384 1333 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Krt12Q64291 487 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Hacd3Q8K2C9 362 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Spata31E9QAF0 1014 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ankrd50F7BE84 1390 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 AF366264G3X9P9 502 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Soat2O88908 525 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Atp9bP98195 1146 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Aldh1l2Q8K009 923 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Sucla2Q9Z2I9 463 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ppp2r3cQ9JK24 453 aa19.28■□□□□ 0.68
Sort1-201ENSMUST00000102632 Myo1eE9Q634 1107 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Timm44O35857 452 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ccdc153P0C7Q1 202 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Kcnj6P48542 425 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Slc16a1P53986 493 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Clul1Q3ZRW6 464 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Maip1Q8BHE8 291 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Tmem179Q8BHH9 233 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ppfia2Q8BSS9 1257 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Cabs1Q8C633 391 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ncoa1P70365 1447 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Zfp408H7BX78 710 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 HunkO88866 714 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Gja8P28236 440 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Papd5Q68ED3 633 aaKnown RBP19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Tbc1d31Q6NXY1 996 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Pomgnt2Q8BW41 605 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Myef2Q8C854 591 aaKnown RBP19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Lonp1Q8CGK3 949 aaKnown RBP19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Spon1Q8VCC9 807 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Cmtm5Q9D6G9 156 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Armc7Q3UJZ3 198 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Gm5169Q5M8P2 212 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Ddx19bQ8BZY3 494 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Mlc1Q8VHK5 382 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Caln1Q9JJG7 219 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Tnfrsf10bQ9QZM4 381 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Cep63Q3UPP8 700 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 Fam114a2Q8VE88 497 aa19.27■□□□□ 0.68
Sort1-201ENSMUST00000102632 PhbP67778 272 aaKnown RBP19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Appl1Q8K3H0 707 aa19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Nxnl1Q8VC33 217 aa19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Prpf6Q91YR7 941 aaKnown RBP19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Serpinb8O08800 374 aaKnown RBP19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Trim80Q3V061 624 aa19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Gm14685Q52KH6 695 aa19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Tubgcp2Q921G8 905 aa19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Rrp15Q9CYX7 281 aaKnown RBP19.27■□□□□ 0.67
Sort1-201ENSMUST00000102632 Prr5lA2AVJ5 370 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Arl4aP61213 200 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Cfap157Q0VFX2 523 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 C87499Q3UX49 493 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Itih3Q61704 889 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Washc5Q8C2E7 1159 aaKnown RBP19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Cdk8Q8R3L8 464 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Trim54Q9ERP3 366 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Arhgef12Q8R4H2 1543 aaKnown RBP19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Lonrf2B2RT44 518 aa19.26■□□□□ 0.67
Sort1-201ENSMUST00000102632 Kif23E9Q5G3 953 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms