RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Lsg1Q3UM18 644 aaKnown RBP8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Gm5414Q6IFZ8 552 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 HelbQ6NVF4 1074 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Zswim7Q9CWQ2 152 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Pard3Q99NH2 1333 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Vwa3bJ9JI28 736 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 EsrraO08580 422 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Krt1P04104 637 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Cab39Q06138 341 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 HarsQ61035 509 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Sugt1Q9CX34 336 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 ParvbQ9ES46 365 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Thoc1Q8R3N6 657 aaKnown RBP8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Prl3d2F6R3P9 224 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Mettl17Q3U2U7 461 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Spout1Q3UHX9 385 aaKnown RBP8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Hdac11Q91WA3 347 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 NonoQ99K48 473 aaKnown RBP8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 CinpQ9D0V8 212 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 OvosQ3UU35 1456 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Myh11O08638 1972 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Trpc6Q61143 930 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Tsc1Q9EP53 1161 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Mrpl40Q9Z2Q5 206 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 1700113H08RikE9Q9Q5 327 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Myo1aO88329 1043 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Nr1h4Q60641 488 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Dnaaf2Q8BPI1 814 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Stx19Q8R1Q0 292 aa8.84□□□□□ -0.99
Spen-201ENSMUST00000078886 Kdm5aQ3UXZ9 1690 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Gbp11A9YVJ5 442 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Gm38392E9Q2A2 434 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ap1s3Q7TN05 154 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 CntrobQ8CB62 887 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Eif2b5Q8CHW4 717 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Kat14Q8CID0 779 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 1700011I03RikE9PYL8 271 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Kcna1P16388 495 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Q3KNL4 93 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Olfml2bQ3V1G4 746 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Sdf4Q61112 361 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Recql4Q75NR7 1216 aaKnown RBP8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ttc14Q9CSP9 761 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Cfap70D3YVL2 1141 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 S100a9P31725 113 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 EspnlQ3UYR4 1005 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Nlrp9aQ66X03 949 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 LzicQ8K3C3 190 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ifi35Q9D8C4 286 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Spata31d1bE9QA57 1361 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Zfp558E9Q1J0 407 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Hsdl2Q2TPA8 490 aaKnown RBP8.83□□□□□ -1
Spen-201ENSMUST00000078886 Mfsd4b4J3QNS5 503 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Fbln2P37889 1221 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Fam81aQ3UXZ6 364 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Nuak1Q641K5 658 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Znf280cQ6P3Y5 742 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Nlrx1Q3TL44 975 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ankrd13cQ3UX43 541 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Arl13bQ640N2 427 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Rab14Q91V41 215 aaKnown RBP8.83□□□□□ -1
Spen-201ENSMUST00000078886 InsrrQ9WTL4 1300 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ankrd13dQ6PD24 605 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ankk1Q8BZ25 745 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Spata4Q8K3V1 295 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Ola1Q9CZ30 396 aaKnown RBP8.83□□□□□ -1
Spen-201ENSMUST00000078886 Cbx6Q9DBY5 414 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Astn2Q80Z10 1352 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Cdcp1Q5U462 833 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 SybuQ8BHS8 665 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Rbm41Q8JZV4 413 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Haus3Q8QZX2 570 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Q922C1 641 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Angptl2Q9R045 493 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Cops6O88545 324 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Gm14685Q52KH6 695 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Stambpl1Q76N33 436 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Trip10Q8CJ53 603 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Dkk3Q9QUN9 349 aa8.83□□□□□ -1
Spen-201ENSMUST00000078886 Shroom2A2ALU4 1481 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Fosl2P47930 326 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Llgl2Q3TJ91 1027 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Lca5Q80ST9 704 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Snx14Q8BHY8 964 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 IarsQ8BU30 1262 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Rapgef5Q8C0Q9 814 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Psma8Q9CWH6 250 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Ythdc2B2RR83 1445 aaKnown RBP8.82□□□□□ -1
Spen-201ENSMUST00000078886 ItkQ03526 625 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Ogfod1Q3U0K8 545 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Khdrbs1Q60749 443 aaKnown RBP8.82□□□□□ -1
Spen-201ENSMUST00000078886 OcrlQ6NVF0 900 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 3830403N18RikQ9D6C3 208 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Rabgef1Q9JM13 491 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Edc4Q3UJB9 1406 aaKnown RBP8.82□□□□□ -1
Spen-201ENSMUST00000078886 Sh2d4aQ9D7V1 421 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Calr3Q9D9Q6 380 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Grin1P35438 938 aa8.82□□□□□ -1
Spen-201ENSMUST00000078886 Sept2P42208 361 aaKnown RBP8.82□□□□□ -1
Spen-201ENSMUST00000078886 Hace1Q3U0D9 909 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms