RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pcdha5Q91Y15 934 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Trim30cD3YVI9 513 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Cacna2d1O08532 1103 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Efcab14Q8BGQ6 484 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Cyp4f39Q8BGU0 532 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Usp38Q8BW70 1042 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Spata17Q9D552 379 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Mxra8Q9DBV4 442 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ebf2O08792 575 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 D1Pas1P16381 660 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ctnnd1P30999 938 aaKnown RBP18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Pstpip1P97814 415 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Tmtc2Q56A06 836 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Zdhhc24Q6IR37 284 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Tlr13Q6R5N8 991 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Rps6ka6Q7TPS0 764 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 PdhbQ9D051 359 aa18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Myh10Q61879 1976 aaKnown RBP18.66■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Pick1Q62083 416 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 CgasQ8C6L5 507 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ubxn1Q922Y1 297 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Speer4bQ9D9F7 267 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Mast2Q60592 1734 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 ProcP33587 460 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Gdpd4Q3TT99 632 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Asic3Q6X1Y6 530 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ndst4Q9EQW8 872 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 ArcQ9WV31 396 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 HmmrQ00547 794 aaKnown RBP18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Mical1Q8VDP3 1048 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Gpaa1Q9WTK3 621 aa18.65■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Prr16A3KMN5 304 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Nmt2O70311 529 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Mx1P09922 631 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 PpardP35396 440 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Stat4P42228 749 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Kdm1aQ6ZQ88 853 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ddx42Q810A7 929 aaKnown RBP18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Igdcc3Q8BQC3 813 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Dusp19Q8K4T5 220 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Efhd1Q9D4J1 240 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Cxcl11Q9JHH5 100 aa18.64■□□□□ 0.58
Ctcf-201ENSMUST00000005841 Ttc6G3UYY4 1857 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Apol7aB2RT54 418 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Cep131Q62036 1060 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Pak2Q8CIN4 524 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 OplahQ8K010 1288 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Pkn3Q8K045 878 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Kbtbd4Q8R179 534 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Dnajc17Q91WT4 303 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Ptpn12P35831 775 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 GckP52792 465 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Ptprn2P80560 1001 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Znf583Q3V080 568 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Tarsl2Q8BLY2 790 aa18.64■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Prss40A6H6T1 365 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Gspt2Q149F3 632 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Abl2Q4JIM5 1182 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Sh3gl1Q62419 368 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Dusp9Q7TNL7 452 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Aldh5a1Q8BWF0 523 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 C4bP01029 1738 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Nap1l2P51860 460 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Elf1Q60775 612 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 GopcQ8BH60 463 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 LRWD1Q8BUI3 648 aaKnown RBP18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Apol8A2VDH7 339 aaKnown RBP18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Fam71aB7XG49 585 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 AfpP02772 605 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 XlrP05531 208 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Mapk6Q61532 720 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Ccdc122Q8BVN0 290 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Slx1bQ8BX32 270 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Epha10Q8BYG9 1007 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Pla2g12bQ99P27 195 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Cd2apQ9JLQ0 637 aa18.63■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Zfp275G3X904 499 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Cyp24a1Q64441 514 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Lrrc59Q922Q8 307 aaKnown RBP18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Chd5A2A8L1 1946 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Klra5Q60652 266 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 EregQ61521 162 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Atp6v0a4Q920R6 833 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Gps2Q921N8 327 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Rasgef1cQ9D300 466 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Dock2Q8C3J5 1828 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 PtgdrP70263 357 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Ddx17Q501J6 650 aaKnown RBP18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Kcnj11Q61743 390 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Fkbp3Q62446 224 aaKnown RBP18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Krt74Q6IFZ9 495 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Haus4Q8BFT2 363 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Pwp2Q8BU03 919 aaKnown RBP18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Exoc1Q8R3S6 894 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Tmed5Q9CXE7 229 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Pex3Q9QXY9 372 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Adgra3Q7TT36 1310 aa18.62■□□□□ 0.57
Ctcf-201ENSMUST00000005841 ErmardE9Q048 622 aa18.61■□□□□ 0.57
Ctcf-201ENSMUST00000005841 TraddQ3U0V2 310 aa18.61■□□□□ 0.57
Ctcf-201ENSMUST00000005841 Myo19Q5SV80 963 aa18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms