RNA–Protein interactions for RNA: ENST00000641604.1

CASC19-244, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,251 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-244ENST00000641604 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
CASC19-244ENST00000641604 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
CASC19-244ENST00000641604 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
CASC19-244ENST00000641604 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
CASC19-244ENST00000641604 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
CASC19-244ENST00000641604 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
CASC19-244ENST00000641604 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
CASC19-244ENST00000641604 NESP48681 1621 aa13.5□□□□□ -0.25
CASC19-244ENST00000641604 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CASC19-244ENST00000641604 SOX12O15370 315 aa13.48□□□□□ -0.25
CASC19-244ENST00000641604 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
CASC19-244ENST00000641604 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
CASC19-244ENST00000641604 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
CASC19-244ENST00000641604 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
CASC19-244ENST00000641604 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 KRTAP3-3Q9BYR6 98 aa13.45□□□□□ -0.26
CASC19-244ENST00000641604 KRTAP3-2Q9BYR7 98 aa13.45□□□□□ -0.26
CASC19-244ENST00000641604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
CASC19-244ENST00000641604 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
CASC19-244ENST00000641604 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
CASC19-244ENST00000641604 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
CASC19-244ENST00000641604 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
CASC19-244ENST00000641604 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 PHF8Q9UPP1 1060 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 ERBB3P21860 1342 aa13.36□□□□□ -0.27
CASC19-244ENST00000641604 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
CASC19-244ENST00000641604 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
CASC19-244ENST00000641604 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.28
CASC19-244ENST00000641604 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
CASC19-244ENST00000641604 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
CASC19-244ENST00000641604 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
CASC19-244ENST00000641604 NLRP6P59044 892 aa13.29□□□□□ -0.28
CASC19-244ENST00000641604 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
CASC19-244ENST00000641604 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
CASC19-244ENST00000641604 WDR62O43379 1518 aa13.26□□□□□ -0.29
CASC19-244ENST00000641604 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
CASC19-244ENST00000641604 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
CASC19-244ENST00000641604 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
CASC19-244ENST00000641604 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
CASC19-244ENST00000641604 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
CASC19-244ENST00000641604 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CASC19-244ENST00000641604 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
CASC19-244ENST00000641604 STK25O00506 426 aa13.17□□□□□ -0.3
CASC19-244ENST00000641604 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
CASC19-244ENST00000641604 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CASC19-244ENST00000641604 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
CASC19-244ENST00000641604 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 KIF3CO14782 793 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
CASC19-244ENST00000641604 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
CASC19-244ENST00000641604 C2orf72A6NCS6 295 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 PKD2Q13563 968 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.327e-7■□□□□ 9.8
CASC19-244ENST00000641604 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 ARHGEF11O15085 1522 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 RGL2O15211 777 aa13.06□□□□□ -0.32
CASC19-244ENST00000641604 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
CASC19-244ENST00000641604 PTGER2P43116 358 aa13.04□□□□□ -0.32
CASC19-244ENST00000641604 CFTRP13569 1480 aa13□□□□□ -0.33
CASC19-244ENST00000641604 SLC34A2O95436 690 aa13□□□□□ -0.33
CASC19-244ENST00000641604 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
CASC19-244ENST00000641604 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
CASC19-244ENST00000641604 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 NUDT7P0C024 238 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
CASC19-244ENST00000641604 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
CASC19-244ENST00000641604 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CASC19-244ENST00000641604 PPP1R37O75864 691 aa12.93□□□□□ -0.34
CASC19-244ENST00000641604 PBX2P40425 430 aa12.93□□□□□ -0.34
CASC19-244ENST00000641604 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
CASC19-244ENST00000641604 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
CASC19-244ENST00000641604 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
CASC19-244ENST00000641604 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
CASC19-244ENST00000641604 WIZO95785 1651 aa12.85□□□□□ -0.35
CASC19-244ENST00000641604 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
CASC19-244ENST00000641604 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
CASC19-244ENST00000641604 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
CASC19-244ENST00000641604 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
CASC19-244ENST00000641604 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
CASC19-244ENST00000641604 KDM4FA0A1W2PPD8 638 aa12.81□□□□□ -0.36
CASC19-244ENST00000641604 FOXK1P85037 733 aa12.81□□□□□ -0.36
CASC19-244ENST00000641604 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
CASC19-244ENST00000641604 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
CASC19-244ENST00000641604 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
CASC19-244ENST00000641604 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
CASC19-244ENST00000641604 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
CASC19-244ENST00000641604 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
CASC19-244ENST00000641604 TOP2AP11388 1531 aaKnown RBP12.75□□□□□ -0.37
CASC19-244ENST00000641604 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
CASC19-244ENST00000641604 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
CASC19-244ENST00000641604 CHD1O14646 1710 aa12.73□□□□□ -0.37
CASC19-244ENST00000641604 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CASC19-244ENST00000641604 TBC1D12O60347 775 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms