RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TIE1P35590 1138 aa10.34□□□□□ -0.75
CPSF6-206ENST00000550987 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
CPSF6-206ENST00000550987 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
CPSF6-206ENST00000550987 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
CPSF6-206ENST00000550987 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
CPSF6-206ENST00000550987 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
CPSF6-206ENST00000550987 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
CPSF6-206ENST00000550987 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
CPSF6-206ENST00000550987 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
CPSF6-206ENST00000550987 AK7Q96M32 723 aa10.3□□□□□ -0.76
CPSF6-206ENST00000550987 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
CPSF6-206ENST00000550987 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
CPSF6-206ENST00000550987 SOCS7O14512 581 aa10.29□□□□□ -0.76
CPSF6-206ENST00000550987 DPYSL4O14531 572 aa10.28□□□□□ -0.76
CPSF6-206ENST00000550987 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
CPSF6-206ENST00000550987 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
CPSF6-206ENST00000550987 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
CPSF6-206ENST00000550987 G3V3G9 751 aa10.26□□□□□ -0.77
CPSF6-206ENST00000550987 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
CPSF6-206ENST00000550987 DPY19L2Q6NUT2 758 aa10.25□□□□□ -0.77
CPSF6-206ENST00000550987 DSG2Q14126 1118 aa10.24□□□□□ -0.77
CPSF6-206ENST00000550987 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
CPSF6-206ENST00000550987 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
CPSF6-206ENST00000550987 ARXQ96QS3 562 aa10.21□□□□□ -0.77
CPSF6-206ENST00000550987 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
CPSF6-206ENST00000550987 FOXK1P85037 733 aa10.19□□□□□ -0.78
CPSF6-206ENST00000550987 PDIA6Q15084 440 aa10.19□□□□□ -0.78
CPSF6-206ENST00000550987 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
CPSF6-206ENST00000550987 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
CPSF6-206ENST00000550987 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
CPSF6-206ENST00000550987 GPBP1L1Q9HC44 474 aaPredicted RBP10.18□□□□□ -0.78
CPSF6-206ENST00000550987 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
CPSF6-206ENST00000550987 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
CPSF6-206ENST00000550987 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
CPSF6-206ENST00000550987 CLCN6P51797 869 aa10.16□□□□□ -0.78
CPSF6-206ENST00000550987 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
CPSF6-206ENST00000550987 HAX1O00165 279 aa10.15□□□□□ -0.78
CPSF6-206ENST00000550987 TRIM66O15016 1216 aa10.15□□□□□ -0.78
CPSF6-206ENST00000550987 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
CPSF6-206ENST00000550987 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
CPSF6-206ENST00000550987 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
CPSF6-206ENST00000550987 PDE4DQ08499 809 aa10.13□□□□□ -0.79
CPSF6-206ENST00000550987 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
CPSF6-206ENST00000550987 PDCD7Q8N8D1 485 aaKnown RBP10.12□□□□□ -0.79
CPSF6-206ENST00000550987 SUPT5HO00267 1087 aaKnown RBP10.11□□□□□ -0.79
CPSF6-206ENST00000550987 PLCG2P16885 1265 aa10.11□□□□□ -0.79
CPSF6-206ENST00000550987 IER5LQ5T953 404 aa10.1□□□□□ -0.79
CPSF6-206ENST00000550987 UPF1Q92900 1129 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPSF6-206ENST00000550987 L3MBTL3Q96JM7 780 aaPredicted RBP10.1□□□□□ -0.79
CPSF6-206ENST00000550987 TBC1D12O60347 775 aa10.09□□□□□ -0.79
CPSF6-206ENST00000550987 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
CPSF6-206ENST00000550987 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
CPSF6-206ENST00000550987 MINK1Q8N4C8 1332 aaPredicted RBP10.08□□□□□ -0.8
CPSF6-206ENST00000550987 ILDR2Q71H61 639 aa10.08□□□□□ -0.8
CPSF6-206ENST00000550987 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
CPSF6-206ENST00000550987 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
CPSF6-206ENST00000550987 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
CPSF6-206ENST00000550987 KIF3CO14782 793 aa10.05□□□□□ -0.8
CPSF6-206ENST00000550987 SEC24BO95487 1268 aa10.05□□□□□ -0.8
CPSF6-206ENST00000550987 DDX12PQ92771 950 aa10.04□□□□□ -0.8
CPSF6-206ENST00000550987 IRF6O14896 467 aa10.03□□□□□ -0.8
CPSF6-206ENST00000550987 FCHSD2O94868 740 aa10.03□□□□□ -0.8
CPSF6-206ENST00000550987 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
CPSF6-206ENST00000550987 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
CPSF6-206ENST00000550987 GNPATO15228 680 aa10.02□□□□□ -0.81
CPSF6-206ENST00000550987 OSBPP22059 807 aa10.02□□□□□ -0.81
CPSF6-206ENST00000550987 ZNF316A6NFI3 1004 aaPredicted RBP10.01□□□□□ -0.81
CPSF6-206ENST00000550987 GPR37O15354 613 aa10.01□□□□□ -0.81
CPSF6-206ENST00000550987 HIC1Q14526 733 aa10.01□□□□□ -0.81
CPSF6-206ENST00000550987 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
CPSF6-206ENST00000550987 ERCC6Q03468 1493 aa10□□□□□ -0.81
CPSF6-206ENST00000550987 OXER1Q8TDS5 423 aa10□□□□□ -0.81
CPSF6-206ENST00000550987 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
CPSF6-206ENST00000550987 FAM117AQ9C073 453 aa10□□□□□ -0.81
CPSF6-206ENST00000550987 EVI5O60447 810 aa9.99□□□□□ -0.81
CPSF6-206ENST00000550987 PTGER2P43116 358 aa9.99□□□□□ -0.81
CPSF6-206ENST00000550987 EVX2Q03828 476 aa9.99□□□□□ -0.81
CPSF6-206ENST00000550987 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
CPSF6-206ENST00000550987 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
CPSF6-206ENST00000550987 TTLL12Q14166 644 aaPredicted RBP9.96□□□□□ -0.82
CPSF6-206ENST00000550987 DCBLD2Q96PD2 775 aa9.96□□□□□ -0.82
CPSF6-206ENST00000550987 FECHP22830 423 aa9.94□□□□□ -0.82
CPSF6-206ENST00000550987 AMHR2Q16671 573 aa9.94□□□□□ -0.82
CPSF6-206ENST00000550987 TMEM92Q6UXU6 159 aa9.94□□□□□ -0.82
CPSF6-206ENST00000550987 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
CPSF6-206ENST00000550987 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
CPSF6-206ENST00000550987 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
CPSF6-206ENST00000550987 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
CPSF6-206ENST00000550987 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
CPSF6-206ENST00000550987 PARP9Q8IXQ6 854 aa9.92□□□□□ -0.82
CPSF6-206ENST00000550987 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
CPSF6-206ENST00000550987 PTGDRQ13258 359 aa9.9□□□□□ -0.82
CPSF6-206ENST00000550987 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
CPSF6-206ENST00000550987 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
CPSF6-206ENST00000550987 PLEKHG3A1L390 1219 aa9.89□□□□□ -0.83
CPSF6-206ENST00000550987 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
CPSF6-206ENST00000550987 GABBR2O75899 941 aa9.88□□□□□ -0.83
CPSF6-206ENST00000550987 SLC39A7Q92504 469 aa9.88□□□□□ -0.83
CPSF6-206ENST00000550987 MAP3K7O43318 606 aa9.87□□□□□ -0.83
CPSF6-206ENST00000550987 EPAS1Q99814 870 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms