RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 FAM177A1Q8N128 213 aaPredicted RBP5.62□□□□□ -1.51
ARHGEF12-209ENST00000530388 PYGBP11216 843 aa5.62□□□□□ -1.51
ARHGEF12-209ENST00000530388 CLSTN1O94985 981 aa5.61□□□□□ -1.51
ARHGEF12-209ENST00000530388 RASEFQ8IZ41 740 aa5.61□□□□□ -1.51
ARHGEF12-209ENST00000530388 IRF5Q13568 498 aa5.61□□□□□ -1.51
ARHGEF12-209ENST00000530388 MFRPQ9BY79 579 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 BCL11AQ9H165 835 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 NCKAP5LQ9HCH0 1330 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 VGFO15240 615 aaPredicted RBP5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 SMYD5Q6GMV2 418 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 TRIM66O15016 1216 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 POM121Q96HA1 1249 aa5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 CWC22Q9HCG8 908 aaKnown RBP5.6□□□□□ -1.51
ARHGEF12-209ENST00000530388 MNX1P50219 401 aaPredicted RBP5.59□□□□□ -1.51
ARHGEF12-209ENST00000530388 PDE4DQ08499 809 aa5.59□□□□□ -1.51
ARHGEF12-209ENST00000530388 DCAF8Q5TAQ9 597 aa5.59□□□□□ -1.51
ARHGEF12-209ENST00000530388 ARHGEF1Q92888 912 aaKnown RBP5.59□□□□□ -1.51
ARHGEF12-209ENST00000530388 ZNF592Q92610 1267 aa5.58□□□□□ -1.52
ARHGEF12-209ENST00000530388 CAPN15O75808 1086 aa5.58□□□□□ -1.52
ARHGEF12-209ENST00000530388 PTMSP20962 102 aa5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 ZNF316A6NFI3 1004 aaPredicted RBP5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 PATL2C9JE40 543 aaKnown RBP5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 E2F4Q16254 413 aa5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 AK7Q96M32 723 aa5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.57□□□□□ -1.52
ARHGEF12-209ENST00000530388 A0A0U1RQG5 324 aaPredicted RBP5.56□□□□□ -1.52
ARHGEF12-209ENST00000530388 NCLP19338 710 aaKnown RBP5.56□□□□□ -1.52
ARHGEF12-209ENST00000530388 SERPINA10Q9UK55 444 aa5.56□□□□□ -1.52
ARHGEF12-209ENST00000530388 ACIN1Q9UKV3 1341 aaKnown RBP5.56□□□□□ -1.52
ARHGEF12-209ENST00000530388 CARNS1A5YM72 827 aa5.56□□□□□ -1.52
ARHGEF12-209ENST00000530388 TRAK2O60296 914 aa5.55□□□□□ -1.52
ARHGEF12-209ENST00000530388 RETREG2Q8NC44 543 aa5.55□□□□□ -1.52
ARHGEF12-209ENST00000530388 CCER1Q8TC90 406 aaPredicted RBP5.55□□□□□ -1.52
ARHGEF12-209ENST00000530388 TICAM2Q86XR7 235 aa5.55□□□□□ -1.52
ARHGEF12-209ENST00000530388 ZBTB47Q9UFB7 747 aaPredicted RBP5.55□□□□□ -1.52
ARHGEF12-209ENST00000530388 GPR37O15354 613 aa5.54□□□□□ -1.52
ARHGEF12-209ENST00000530388 PPP1R1BQ9UD71 204 aaPredicted RBP5.54□□□□□ -1.52
ARHGEF12-209ENST00000530388 CANXP27824 592 aaKnown RBP5.53□□□□□ -1.52
ARHGEF12-209ENST00000530388 GSE1Q14687 1217 aa5.53□□□□□ -1.52
ARHGEF12-209ENST00000530388 NOL8Q76FK4 1167 aaKnown RBP5.52□□□□□ -1.53
ARHGEF12-209ENST00000530388 CCDC27Q2M243 656 aa5.52□□□□□ -1.53
ARHGEF12-209ENST00000530388 FBXO31Q5XUX0 539 aaPredicted RBP5.51□□□□□ -1.53
ARHGEF12-209ENST00000530388 CERS3Q8IU89 383 aa5.51□□□□□ -1.53
ARHGEF12-209ENST00000530388 FNBP4Q8N3X1 1017 aaPredicted RBP5.51□□□□□ -1.53
ARHGEF12-209ENST00000530388 SGIP1Q9BQI5 828 aa5.51□□□□□ -1.53
ARHGEF12-209ENST00000530388 FECHP22830 423 aa5.5□□□□□ -1.53
ARHGEF12-209ENST00000530388 PARP9Q8IXQ6 854 aa5.5□□□□□ -1.53
ARHGEF12-209ENST00000530388 ZEB1P37275 1124 aaPredicted RBP5.5□□□□□ -1.53
ARHGEF12-209ENST00000530388 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
ARHGEF12-209ENST00000530388 MCM6Q14566 821 aa5.49□□□□□ -1.53
ARHGEF12-209ENST00000530388 GPIHBP1Q8IV16 184 aa5.49□□□□□ -1.53
ARHGEF12-209ENST00000530388 REPIN1Q9BWE0 567 aaKnown RBP5.49□□□□□ -1.53
ARHGEF12-209ENST00000530388 PCDHB8Q9UN66 801 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 PCDHB13Q9Y5F0 798 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 SPDYE2BA6NHP3 402 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 A6NJR5 290 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 SPDYE6P0CI01 402 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 SPDYE2Q495Y8 402 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 FBXO22Q8NEZ5 403 aa5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 NAP1L5Q96NT1 182 aaPredicted RBP5.48□□□□□ -1.53
ARHGEF12-209ENST00000530388 PKNOX2Q96KN3 472 aa5.47□□□□□ -1.53
ARHGEF12-209ENST00000530388 CREBZFQ9NS37 354 aa5.47□□□□□ -1.53
ARHGEF12-209ENST00000530388 DDRGK1Q96HY6 314 aa5.47□□□□□ -1.53
ARHGEF12-209ENST00000530388 LARP6Q9BRS8 491 aaKnown RBP5.46□□□□□ -1.53
ARHGEF12-209ENST00000530388 CHRM1P11229 460 aaPredicted RBP5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 MS4A1P11836 297 aa5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 PROSER2Q86WR7 435 aaPredicted RBP5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 SMARCA5O60264 1052 aaPredicted RBP5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 KDM4AO75164 1064 aa5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 IRX6P78412 446 aaPredicted RBP5.46□□□□□ -1.54
ARHGEF12-209ENST00000530388 PCMTD1Q96MG8 357 aaPredicted RBP5.45□□□□□ -1.54
ARHGEF12-209ENST00000530388 CCDC125Q86Z20 511 aa5.45□□□□□ -1.54
ARHGEF12-209ENST00000530388 UNCXA6NJT0 531 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 CC2D2BQ6DHV5 1058 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 HMGB1P1B2RPK0 211 aaPredicted RBP5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 CCDC102AQ96A19 550 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 PHF8Q9UPP1 1060 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 ANKRD62A6NC57 917 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 FAM212AQ96EL1 285 aa5.44□□□□□ -1.54
ARHGEF12-209ENST00000530388 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
ARHGEF12-209ENST00000530388 BRPF3Q9ULD4 1205 aa5.43□□□□□ -1.54
ARHGEF12-209ENST00000530388 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
ARHGEF12-209ENST00000530388 WWC1Q8IX03 1113 aa5.43□□□□□ -1.54
ARHGEF12-209ENST00000530388 CCDC136Q96JN2 1154 aa5.43□□□□□ -1.54
ARHGEF12-209ENST00000530388 CSB-PGBD3P0DP91 1061 aa5.42□□□□□ -1.54
ARHGEF12-209ENST00000530388 MS4A4AQ96JQ5 239 aa5.42□□□□□ -1.54
ARHGEF12-209ENST00000530388 GORABQ5T7V8 394 aa5.42□□□□□ -1.54
ARHGEF12-209ENST00000530388 DSG3P32926 999 aa5.42□□□□□ -1.54
ARHGEF12-209ENST00000530388 PLSCR2Q9NRY7 297 aa5.42□□□□□ -1.54
ARHGEF12-209ENST00000530388 SETQ01105 290 aaPredicted RBP5.41□□□□□ -1.54
ARHGEF12-209ENST00000530388 EFCAB3Q8N7B9 438 aa5.41□□□□□ -1.54
ARHGEF12-209ENST00000530388 OXER1Q8TDS5 423 aa5.41□□□□□ -1.54
ARHGEF12-209ENST00000530388 MYH16Q9H6N6 1097 aa5.41□□□□□ -1.54
ARHGEF12-209ENST00000530388 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
ARHGEF12-209ENST00000530388 KCNA1Q09470 495 aa5.4□□□□□ -1.54
ARHGEF12-209ENST00000530388 RNF39Q9H2S5 420 aa5.4□□□□□ -1.54
ARHGEF12-209ENST00000530388 PPP1R15AO75807 674 aaPredicted RBP5.4□□□□□ -1.54
ARHGEF12-209ENST00000530388 CRISPLD2Q9H0B8 497 aa5.4□□□□□ -1.55
ARHGEF12-209ENST00000530388 TSR1Q2NL82 804 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms