RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
FDFT1-213ENST00000528729 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
FDFT1-213ENST00000528729 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
FDFT1-213ENST00000528729 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
FDFT1-213ENST00000528729 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.66
FDFT1-213ENST00000528729 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
FDFT1-213ENST00000528729 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
FDFT1-213ENST00000528729 MCM6Q14566 821 aa10.86□□□□□ -0.67
FDFT1-213ENST00000528729 FAM177A1Q8N128 213 aaPredicted RBP10.86□□□□□ -0.67
FDFT1-213ENST00000528729 PDE4CQ08493 712 aa10.85□□□□□ -0.67
FDFT1-213ENST00000528729 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
FDFT1-213ENST00000528729 ARIH1Q9Y4X5 557 aaPredicted RBP10.84□□□□□ -0.67
FDFT1-213ENST00000528729 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
FDFT1-213ENST00000528729 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
FDFT1-213ENST00000528729 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
FDFT1-213ENST00000528729 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
FDFT1-213ENST00000528729 FAM212AQ96EL1 285 aa10.81□□□□□ -0.68
FDFT1-213ENST00000528729 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
FDFT1-213ENST00000528729 BRD2P25440 801 aaKnown RBP10.79□□□□□ -0.68
FDFT1-213ENST00000528729 KCNA1Q09470 495 aa10.78□□□□□ -0.68
FDFT1-213ENST00000528729 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
FDFT1-213ENST00000528729 PCMTD1Q96MG8 357 aaPredicted RBP10.75□□□□□ -0.69
FDFT1-213ENST00000528729 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
FDFT1-213ENST00000528729 POLR3GLQ9BT43 218 aa10.73□□□□□ -0.69
FDFT1-213ENST00000528729 AMHR2Q16671 573 aa10.71□□□□□ -0.69
FDFT1-213ENST00000528729 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
FDFT1-213ENST00000528729 RB1CC1Q8TDY2 1594 aa10.71□□□□□ -0.69
FDFT1-213ENST00000528729 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
FDFT1-213ENST00000528729 BRD1O95696 1058 aa10.7□□□□□ -0.7
FDFT1-213ENST00000528729 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
FDFT1-213ENST00000528729 DHX37Q8IY37 1157 aaKnown RBP10.7□□□□□ -0.7
FDFT1-213ENST00000528729 POM121Q96HA1 1249 aa10.7□□□□□ -0.7
FDFT1-213ENST00000528729 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
FDFT1-213ENST00000528729 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
FDFT1-213ENST00000528729 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
FDFT1-213ENST00000528729 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
FDFT1-213ENST00000528729 MFRPQ9BY79 579 aa10.68□□□□□ -0.7
FDFT1-213ENST00000528729 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
FDFT1-213ENST00000528729 NACADO15069 1562 aa10.68□□□□□ -0.7
FDFT1-213ENST00000528729 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
FDFT1-213ENST00000528729 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
FDFT1-213ENST00000528729 MFSD10Q14728 455 aa10.65□□□□□ -0.7
FDFT1-213ENST00000528729 GPR37O15354 613 aa10.63□□□□□ -0.71
FDFT1-213ENST00000528729 CCDC102AQ96A19 550 aa10.63□□□□□ -0.71
FDFT1-213ENST00000528729 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
FDFT1-213ENST00000528729 PPP1R37O75864 691 aa10.62□□□□□ -0.71
FDFT1-213ENST00000528729 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
FDFT1-213ENST00000528729 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
FDFT1-213ENST00000528729 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
FDFT1-213ENST00000528729 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
FDFT1-213ENST00000528729 LARP6Q9BRS8 491 aaKnown RBP10.61□□□□□ -0.71
FDFT1-213ENST00000528729 USTQ9Y2C2 406 aa10.61□□□□□ -0.71
FDFT1-213ENST00000528729 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
FDFT1-213ENST00000528729 PYGBP11216 843 aa10.6□□□□□ -0.71
FDFT1-213ENST00000528729 SND1Q7KZF4 910 aaKnown RBP eCLIP10.6□□□□□ -0.711e-10■■■□□ 16.6
FDFT1-213ENST00000528729 PDE4AP27815 886 aa10.59□□□□□ -0.71
FDFT1-213ENST00000528729 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
FDFT1-213ENST00000528729 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
FDFT1-213ENST00000528729 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
FDFT1-213ENST00000528729 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
FDFT1-213ENST00000528729 IRF6O14896 467 aa10.57□□□□□ -0.72
FDFT1-213ENST00000528729 CAPN15O75808 1086 aa10.56□□□□□ -0.72
FDFT1-213ENST00000528729 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
FDFT1-213ENST00000528729 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
FDFT1-213ENST00000528729 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
FDFT1-213ENST00000528729 DDX27Q96GQ7 796 aaKnown RBP10.54□□□□□ -0.72
FDFT1-213ENST00000528729 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
FDFT1-213ENST00000528729 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
FDFT1-213ENST00000528729 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
FDFT1-213ENST00000528729 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
FDFT1-213ENST00000528729 ZNF467Q7Z7K2 595 aaPredicted RBP10.52□□□□□ -0.73
FDFT1-213ENST00000528729 CRISPLD2Q9H0B8 497 aa10.51□□□□□ -0.73
FDFT1-213ENST00000528729 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
FDFT1-213ENST00000528729 PBXIP1Q96AQ6 731 aa10.5□□□□□ -0.73
FDFT1-213ENST00000528729 ABCB7O75027 752 aa10.49□□□□□ -0.73
FDFT1-213ENST00000528729 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
FDFT1-213ENST00000528729 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
FDFT1-213ENST00000528729 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
FDFT1-213ENST00000528729 SPATA32Q96LK8 384 aa10.49□□□□□ -0.73
FDFT1-213ENST00000528729 MS4A1P11836 297 aa10.48□□□□□ -0.73
FDFT1-213ENST00000528729 NLRP6P59044 892 aa10.48□□□□□ -0.73
FDFT1-213ENST00000528729 GIGYF2Q6Y7W6 1299 aaKnown RBP10.48□□□□□ -0.73
FDFT1-213ENST00000528729 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
FDFT1-213ENST00000528729 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
FDFT1-213ENST00000528729 TBC1D12O60347 775 aa10.45□□□□□ -0.74
FDFT1-213ENST00000528729 NCLP19338 710 aaKnown RBP10.45□□□□□ -0.74
FDFT1-213ENST00000528729 MNX1P50219 401 aaPredicted RBP10.45□□□□□ -0.74
FDFT1-213ENST00000528729 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
FDFT1-213ENST00000528729 KIAA1522Q9P206 1035 aaPredicted RBP10.44□□□□□ -0.74
FDFT1-213ENST00000528729 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
FDFT1-213ENST00000528729 SMARCA5O60264 1052 aaPredicted RBP10.43□□□□□ -0.74
FDFT1-213ENST00000528729 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
FDFT1-213ENST00000528729 ANKRD13AQ8IZ07 590 aa10.43□□□□□ -0.74
FDFT1-213ENST00000528729 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
FDFT1-213ENST00000528729 ARID4BQ4LE39 1312 aaPredicted RBP10.42□□□□□ -0.74
FDFT1-213ENST00000528729 GNPATO15228 680 aa10.41□□□□□ -0.74
FDFT1-213ENST00000528729 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
FDFT1-213ENST00000528729 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
FDFT1-213ENST00000528729 GLMNQ92990 594 aa10.41□□□□□ -0.74
FDFT1-213ENST00000528729 MRRFQ96E11 262 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms