RNA–Protein interactions for RNA: ENST00000497935.5

NELFCD-212, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-212ENST00000497935 FLIIQ13045 1269 aa10.76□□□□□ -0.69
NELFCD-212ENST00000497935 E2F4Q16254 413 aa10.76□□□□□ -0.69
NELFCD-212ENST00000497935 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
NELFCD-212ENST00000497935 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
NELFCD-212ENST00000497935 RAD21O60216 631 aa10.73□□□□□ -0.69
NELFCD-212ENST00000497935 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
NELFCD-212ENST00000497935 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
NELFCD-212ENST00000497935 IGSF3O75054 1194 aa10.69□□□□□ -0.7
NELFCD-212ENST00000497935 CAPN15O75808 1086 aa10.69□□□□□ -0.7
NELFCD-212ENST00000497935 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
NELFCD-212ENST00000497935 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
NELFCD-212ENST00000497935 KRI1Q8N9T8 703 aaKnown RBP10.68□□□□□ -0.7
NELFCD-212ENST00000497935 A6NJR5 290 aa10.67□□□□□ -0.7
NELFCD-212ENST00000497935 PDE4DQ08499 809 aa10.67□□□□□ -0.7
NELFCD-212ENST00000497935 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
NELFCD-212ENST00000497935 TRIM66O15016 1216 aa10.66□□□□□ -0.7
NELFCD-212ENST00000497935 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
NELFCD-212ENST00000497935 TRAK2O60296 914 aa10.65□□□□□ -0.7
NELFCD-212ENST00000497935 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
NELFCD-212ENST00000497935 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
NELFCD-212ENST00000497935 ABCC8Q09428 1581 aa10.62□□□□□ -0.71
NELFCD-212ENST00000497935 ZNF608Q9ULD9 1512 aaPredicted RBP10.62□□□□□ -0.71
NELFCD-212ENST00000497935 ABCB7O75027 752 aa10.61□□□□□ -0.71
NELFCD-212ENST00000497935 FAM117AQ9C073 453 aa10.61□□□□□ -0.71
NELFCD-212ENST00000497935 MTMR7Q9Y216 660 aa10.61□□□□□ -0.71
NELFCD-212ENST00000497935 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
NELFCD-212ENST00000497935 ONECUT3O60422 494 aaPredicted RBP10.6□□□□□ -0.71
NELFCD-212ENST00000497935 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
NELFCD-212ENST00000497935 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
NELFCD-212ENST00000497935 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
NELFCD-212ENST00000497935 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
NELFCD-212ENST00000497935 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.729e-8■■■■■ 30.5
NELFCD-212ENST00000497935 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
NELFCD-212ENST00000497935 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
NELFCD-212ENST00000497935 SOGA1O94964 1423 aa10.56□□□□□ -0.72
NELFCD-212ENST00000497935 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
NELFCD-212ENST00000497935 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
NELFCD-212ENST00000497935 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
NELFCD-212ENST00000497935 TDRD9Q8NDG6 1382 aaKnown RBP10.54□□□□□ -0.72
NELFCD-212ENST00000497935 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
NELFCD-212ENST00000497935 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
NELFCD-212ENST00000497935 POLA1P09884 1462 aaPredicted RBP10.54□□□□□ -0.72
NELFCD-212ENST00000497935 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
NELFCD-212ENST00000497935 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.72
NELFCD-212ENST00000497935 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
NELFCD-212ENST00000497935 PYGBP11216 843 aa10.51□□□□□ -0.73
NELFCD-212ENST00000497935 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-212ENST00000497935 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-212ENST00000497935 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
NELFCD-212ENST00000497935 GZF1Q9H116 711 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-212ENST00000497935 SERPINA10Q9UK55 444 aa10.5□□□□□ -0.73
NELFCD-212ENST00000497935 TARBP1Q13395 1621 aaKnown RBP10.5□□□□□ -0.73
NELFCD-212ENST00000497935 CUX1P39880 1505 aa10.49□□□□□ -0.73
NELFCD-212ENST00000497935 HSP90B1P14625 803 aaKnown RBP10.49□□□□□ -0.73
NELFCD-212ENST00000497935 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
NELFCD-212ENST00000497935 CCDC97Q96F63 343 aaPredicted RBP10.49□□□□□ -0.73
NELFCD-212ENST00000497935 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
NELFCD-212ENST00000497935 CDK11AQ9UQ88 783 aaPredicted RBP10.48□□□□□ -0.73
NELFCD-212ENST00000497935 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
NELFCD-212ENST00000497935 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
NELFCD-212ENST00000497935 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
NELFCD-212ENST00000497935 EIF5BO60841 1220 aaKnown RBP10.46□□□□□ -0.73
NELFCD-212ENST00000497935 CYB5RLQ6IPT4 315 aa10.46□□□□□ -0.73
NELFCD-212ENST00000497935 ZNF777Q9ULD5 760 aaPredicted RBP10.46□□□□□ -0.73
NELFCD-212ENST00000497935 CHD1O14646 1710 aa10.45□□□□□ -0.74
NELFCD-212ENST00000497935 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 E9PSI1 815 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 PPP1R37O75864 691 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 RIMBP3CA6NJZ7 1639 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 RIMBP3BA6NNM3 1639 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 RIMBP3Q9UFD9 1639 aa10.44□□□□□ -0.74
NELFCD-212ENST00000497935 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
NELFCD-212ENST00000497935 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
NELFCD-212ENST00000497935 MCM6Q14566 821 aa10.42□□□□□ -0.74
NELFCD-212ENST00000497935 PUS7Q96PZ0 661 aaKnown RBP10.42□□□□□ -0.74
NELFCD-212ENST00000497935 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
NELFCD-212ENST00000497935 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
NELFCD-212ENST00000497935 MFSD10Q14728 455 aa10.41□□□□□ -0.74
NELFCD-212ENST00000497935 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
NELFCD-212ENST00000497935 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
NELFCD-212ENST00000497935 PDAP1Q13442 181 aaKnown RBP10.4□□□□□ -0.74
NELFCD-212ENST00000497935 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
NELFCD-212ENST00000497935 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
NELFCD-212ENST00000497935 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.75
NELFCD-212ENST00000497935 IRF5Q13568 498 aa10.39□□□□□ -0.75
NELFCD-212ENST00000497935 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
NELFCD-212ENST00000497935 PDE4AP27815 886 aa10.38□□□□□ -0.75
NELFCD-212ENST00000497935 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
NELFCD-212ENST00000497935 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
NELFCD-212ENST00000497935 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
NELFCD-212ENST00000497935 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
NELFCD-212ENST00000497935 AMHR2Q16671 573 aa10.36□□□□□ -0.75
NELFCD-212ENST00000497935 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
NELFCD-212ENST00000497935 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
NELFCD-212ENST00000497935 ABCA10Q8WWZ4 1543 aa10.36□□□□□ -0.75
NELFCD-212ENST00000497935 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
NELFCD-212ENST00000497935 MINK1Q8N4C8 1332 aaPredicted RBP10.35□□□□□ -0.75
NELFCD-212ENST00000497935 PBRM1Q86U86 1689 aa10.35□□□□□ -0.75
NELFCD-212ENST00000497935 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms