RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RRP12Q5JTH9 1297 aaKnown RBP9.87□□□□□ -0.83
BRCA1-221ENST00000493795 CREBRFQ8IUR6 639 aa9.87□□□□□ -0.83
BRCA1-221ENST00000493795 PHF14O94880 888 aa9.87□□□□□ -0.83
BRCA1-221ENST00000493795 CCDC70Q6NSX1 233 aa9.87□□□□□ -0.83
BRCA1-221ENST00000493795 TMX4Q9H1E5 349 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-221ENST00000493795 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-221ENST00000493795 CC2D1BQ5T0F9 858 aaKnown RBP9.86□□□□□ -0.83
BRCA1-221ENST00000493795 IPO8O15397 1037 aaKnown RBP9.85□□□□□ -0.83
BRCA1-221ENST00000493795 RTF1Q92541 710 aaKnown RBP9.85□□□□□ -0.83
BRCA1-221ENST00000493795 CALD1Q05682 793 aaKnown RBP9.84□□□□□ -0.83
BRCA1-221ENST00000493795 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
BRCA1-221ENST00000493795 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
BRCA1-221ENST00000493795 GPATCH3Q96I76 525 aa9.84□□□□□ -0.83
BRCA1-221ENST00000493795 APBB1O00213 710 aa9.83□□□□□ -0.84
BRCA1-221ENST00000493795 TPM2P07951 284 aa9.82□□□□□ -0.84
BRCA1-221ENST00000493795 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-221ENST00000493795 RWDD1Q9H446 243 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-221ENST00000493795 ZNF771Q7L3S4 317 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-221ENST00000493795 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-221ENST00000493795 MARCH6O60337 910 aa9.82□□□□□ -0.84
BRCA1-221ENST00000493795 TPD52L1Q16890 204 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-221ENST00000493795 FBXO3Q9UK99 471 aa9.82□□□□□ -0.84
BRCA1-221ENST00000493795 GORABQ5T7V8 394 aa9.81□□□□□ -0.84
BRCA1-221ENST00000493795 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
BRCA1-221ENST00000493795 RSPH6AQ9H0K4 717 aa9.81□□□□□ -0.84
BRCA1-221ENST00000493795 TPM1P09493 284 aa9.81□□□□□ -0.84
BRCA1-221ENST00000493795 CCAR2Q8N163 923 aaKnown RBP9.81□□□□□ -0.84
BRCA1-221ENST00000493795 PES1O00541 588 aaKnown RBP9.8□□□□□ -0.84
BRCA1-221ENST00000493795 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
BRCA1-221ENST00000493795 VPS53Q5VIR6 699 aa9.8□□□□□ -0.84
BRCA1-221ENST00000493795 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
BRCA1-221ENST00000493795 TEX35Q5T0J7 233 aa9.8□□□□□ -0.84
BRCA1-221ENST00000493795 TMF1P82094 1093 aa9.79□□□□□ -0.84
BRCA1-221ENST00000493795 RBM19Q9Y4C8 960 aaKnown RBP9.79□□□□□ -0.84
BRCA1-221ENST00000493795 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
BRCA1-221ENST00000493795 SF3A1Q15459 793 aaKnown RBP9.79□□□□□ -0.84
BRCA1-221ENST00000493795 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-221ENST00000493795 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
BRCA1-221ENST00000493795 ITPRIPQ8IWB1 547 aa9.78□□□□□ -0.84
BRCA1-221ENST00000493795 MORC1Q86VD1 984 aa9.78□□□□□ -0.84
BRCA1-221ENST00000493795 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-221ENST00000493795 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
BRCA1-221ENST00000493795 ABCC9O60706 1549 aa9.78□□□□□ -0.84
BRCA1-221ENST00000493795 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.84
BRCA1-221ENST00000493795 KIF16BQ96L93 1317 aa9.77□□□□□ -0.84
BRCA1-221ENST00000493795 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 HMMRO75330 724 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 CDR1P51861 262 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 NOM1Q5C9Z4 860 aaKnown RBP9.77□□□□□ -0.85
BRCA1-221ENST00000493795 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 TAF7LQ5H9L4 462 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
BRCA1-221ENST00000493795 G3V3G9 751 aa9.76□□□□□ -0.85
BRCA1-221ENST00000493795 GOLGA6L19H0YKK7 550 aa9.76□□□□□ -0.85
BRCA1-221ENST00000493795 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
BRCA1-221ENST00000493795 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
BRCA1-221ENST00000493795 SOX12O15370 315 aa9.75□□□□□ -0.85
BRCA1-221ENST00000493795 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
BRCA1-221ENST00000493795 ZNF330Q9Y3S2 320 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-221ENST00000493795 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
BRCA1-221ENST00000493795 ST18O60284 1047 aa9.75□□□□□ -0.85
BRCA1-221ENST00000493795 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
BRCA1-221ENST00000493795 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
BRCA1-221ENST00000493795 IPO7O95373 1038 aaKnown RBP9.74□□□□□ -0.85
BRCA1-221ENST00000493795 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
BRCA1-221ENST00000493795 AK7Q96M32 723 aa9.74□□□□□ -0.85
BRCA1-221ENST00000493795 TOMM22Q9NS69 142 aa9.74□□□□□ -0.85
BRCA1-221ENST00000493795 BECN2A8MW95 431 aa9.74□□□□□ -0.85
BRCA1-221ENST00000493795 H3BQV1 296 aa9.73□□□□□ -0.85
BRCA1-221ENST00000493795 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
BRCA1-221ENST00000493795 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
BRCA1-221ENST00000493795 STK31Q9BXU1 1019 aa9.73□□□□□ -0.85
BRCA1-221ENST00000493795 RUFY1Q96T51 708 aa9.73□□□□□ -0.85
BRCA1-221ENST00000493795 CLIP1P30622 1438 aa9.73□□□□□ -0.85
BRCA1-221ENST00000493795 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-221ENST00000493795 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
BRCA1-221ENST00000493795 PCMTD1Q96MG8 357 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-221ENST00000493795 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
BRCA1-221ENST00000493795 CCDC191Q8NCU4 936 aa9.72□□□□□ -0.85
BRCA1-221ENST00000493795 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
BRCA1-221ENST00000493795 IPO9Q96P70 1041 aaKnown RBP9.72□□□□□ -0.85
BRCA1-221ENST00000493795 ATP6V1DQ9Y5K8 247 aa9.72□□□□□ -0.85
BRCA1-221ENST00000493795 TCEAL9Q9UHQ7 104 aa9.71□□□□□ -0.85
BRCA1-221ENST00000493795 HDGFL2Q7Z4V5 671 aaPredicted RBP9.71□□□□□ -0.85
BRCA1-221ENST00000493795 ANKRD20A12PQ8NF67 263 aa9.71□□□□□ -0.85
BRCA1-221ENST00000493795 CCDC47Q96A33 483 aaKnown RBP9.71□□□□□ -0.85
BRCA1-221ENST00000493795 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-221ENST00000493795 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
BRCA1-221ENST00000493795 AKAP17AQ02040 695 aaKnown RBP9.71□□□□□ -0.86
BRCA1-221ENST00000493795 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
BRCA1-221ENST00000493795 MAP7D2Q96T17 732 aa9.71□□□□□ -0.86
BRCA1-221ENST00000493795 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.86
BRCA1-221ENST00000493795 SPAG9O60271 1321 aaKnown RBP9.7□□□□□ -0.86
BRCA1-221ENST00000493795 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
BRCA1-221ENST00000493795 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
BRCA1-221ENST00000493795 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
BRCA1-221ENST00000493795 CCER2I3L3R5 266 aa9.7□□□□□ -0.86
BRCA1-221ENST00000493795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.864e-6■■■■■ 85.3
BRCA1-221ENST00000493795 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
BRCA1-221ENST00000493795 KANK1Q14678 1352 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms