RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 BAZ1BQ9UIG0 1483 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP2-209ENST00000473282 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MTERF4Q7Z6M4 381 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP2-209ENST00000473282 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP2-209ENST00000473282 CHMP3Q9Y3E7 222 aa10.43□□□□□ -0.74
CDK5RAP2-209ENST00000473282 RBM10P98175 930 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP2-209ENST00000473282 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP2-209ENST00000473282 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP2-209ENST00000473282 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
CDK5RAP2-209ENST00000473282 CLIP1P30622 1438 aa10.4□□□□□ -0.74
CDK5RAP2-209ENST00000473282 TEX35Q5T0J7 233 aa10.4□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
CDK5RAP2-209ENST00000473282 GPS2Q13227 327 aa10.39□□□□□ -0.75
CDK5RAP2-209ENST00000473282 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
CDK5RAP2-209ENST00000473282 KCNA4P22459 653 aa10.39□□□□□ -0.75
CDK5RAP2-209ENST00000473282 TSPYL1Q9H0U9 437 aa10.39□□□□□ -0.75
CDK5RAP2-209ENST00000473282 MPHOSPH10O00566 681 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP2-209ENST00000473282 HSP90AB3PQ58FF7 597 aa10.38□□□□□ -0.75
CDK5RAP2-209ENST00000473282 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP2-209ENST00000473282 RSPH4AQ5TD94 716 aa10.38□□□□□ -0.75
CDK5RAP2-209ENST00000473282 CWC15Q9P013 229 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP2-209ENST00000473282 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP2-209ENST00000473282 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
CDK5RAP2-209ENST00000473282 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP2-209ENST00000473282 WDR78Q5VTH9 848 aa10.36□□□□□ -0.75
CDK5RAP2-209ENST00000473282 SUDS3Q9H7L9 328 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP2-209ENST00000473282 SETSIPP0DME0 302 aa10.36□□□□□ -0.75
CDK5RAP2-209ENST00000473282 NAP1L1P55209 391 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP2-209ENST00000473282 USP8P40818 1118 aa10.35□□□□□ -0.75
CDK5RAP2-209ENST00000473282 MIER1Q8N108 512 aa10.35□□□□□ -0.75
CDK5RAP2-209ENST00000473282 ISY1Q9ULR0 285 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP2-209ENST00000473282 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
CDK5RAP2-209ENST00000473282 RBM28Q9NW13 759 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP2-209ENST00000473282 GPATCH11Q8N954 259 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 FAM13BQ9NYF5 915 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 ZRSR1Q15695 479 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP2-209ENST00000473282 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.75
CDK5RAP2-209ENST00000473282 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
CDK5RAP2-209ENST00000473282 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
CDK5RAP2-209ENST00000473282 RRP7BPQ9NSQ0 103 aa10.32□□□□□ -0.76
CDK5RAP2-209ENST00000473282 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP2-209ENST00000473282 HTATSF1O43719 755 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP2-209ENST00000473282 MRS2Q9HD23 443 aa10.31□□□□□ -0.76
CDK5RAP2-209ENST00000473282 PRDM10Q9NQV6 1147 aa10.31□□□□□ -0.76
CDK5RAP2-209ENST00000473282 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
CDK5RAP2-209ENST00000473282 TNNT1P13805 278 aa10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 SH3BGRP55822 239 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 DZIP1Q86YF9 867 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 NOL8Q76FK4 1167 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP2-209ENST00000473282 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
CDK5RAP2-209ENST00000473282 E9PSI1 815 aa10.29□□□□□ -0.76
CDK5RAP2-209ENST00000473282 BAZ1AQ9NRL2 1556 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP2-209ENST00000473282 GIMAP7Q8NHV1 300 aa10.29□□□□□ -0.76
CDK5RAP2-209ENST00000473282 TCERG1O14776 1098 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP2-209ENST00000473282 RAD21O60216 631 aa10.28□□□□□ -0.76
CDK5RAP2-209ENST00000473282 GOLGA6L19H0YKK7 550 aa10.28□□□□□ -0.76
CDK5RAP2-209ENST00000473282 TPM2P07951 284 aa10.28□□□□□ -0.76
CDK5RAP2-209ENST00000473282 EEA1Q15075 1411 aa10.28□□□□□ -0.76
CDK5RAP2-209ENST00000473282 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.76
CDK5RAP2-209ENST00000473282 RASSF8Q8NHQ8 419 aa10.27□□□□□ -0.77
CDK5RAP2-209ENST00000473282 FGD1P98174 961 aa10.27□□□□□ -0.77
CDK5RAP2-209ENST00000473282 HMMRO75330 724 aa10.27□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CNPY4Q8N129 248 aa10.27□□□□□ -0.77
CDK5RAP2-209ENST00000473282 KIF27Q86VH2 1401 aa10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CALD1Q05682 793 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 TDO2P48775 406 aa10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 ZRSR2Q15696 482 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 FTSJ3Q8IY81 847 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CEP164Q9UPV0 1460 aa10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
CDK5RAP2-209ENST00000473282 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP2-209ENST00000473282 LMOD3Q0VAK6 560 aa10.25□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CCP110O43303 1012 aa10.25□□□□□ -0.77
CDK5RAP2-209ENST00000473282 PHF14O94880 888 aa10.24□□□□□ -0.77
CDK5RAP2-209ENST00000473282 ZNF622Q969S3 477 aaKnown RBP eCLIP10.24□□□□□ -0.772e-7■■■□□ 15.7
CDK5RAP2-209ENST00000473282 CCDC34Q96HJ3 373 aa10.24□□□□□ -0.77
CDK5RAP2-209ENST00000473282 CECR2Q9BXF3 1484 aa10.24□□□□□ -0.77
CDK5RAP2-209ENST00000473282 H0YHG0 523 aa10.24□□□□□ -0.77
CDK5RAP2-209ENST00000473282 EIF4G2P78344 907 aaKnown RBP eCLIP10.24□□□□□ -0.778e-7■■■■■ 28.7
CDK5RAP2-209ENST00000473282 GOLGA6L10A0A0M3HER8 536 aa10.23□□□□□ -0.77
CDK5RAP2-209ENST00000473282 GOLGA6L10A6NI86 522 aa10.23□□□□□ -0.77
CDK5RAP2-209ENST00000473282 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP2-209ENST00000473282 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP2-209ENST00000473282 DRC7Q8IY82 874 aa10.22□□□□□ -0.77
CDK5RAP2-209ENST00000473282 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.77
CDK5RAP2-209ENST00000473282 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP2-209ENST00000473282 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP2-209ENST00000473282 DNAJC2Q99543 621 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms