RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-204ENST00000467371 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPTBN1-204ENST00000467371 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-204ENST00000467371 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
SPTBN1-204ENST00000467371 PWP2Q15269 919 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-204ENST00000467371 CNPY4Q8N129 248 aa10.62□□□□□ -0.71
SPTBN1-204ENST00000467371 RETREG2Q8NC44 543 aa10.61□□□□□ -0.71
SPTBN1-204ENST00000467371 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
SPTBN1-204ENST00000467371 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-204ENST00000467371 RBM10P98175 930 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-204ENST00000467371 EXOC8Q8IYI6 725 aa10.6□□□□□ -0.71
SPTBN1-204ENST00000467371 RIPOR2Q9Y4F9 1068 aa10.6□□□□□ -0.71
SPTBN1-204ENST00000467371 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
SPTBN1-204ENST00000467371 A6NJR5 290 aa10.59□□□□□ -0.71
SPTBN1-204ENST00000467371 ZMYND10O75800 440 aa10.59□□□□□ -0.71
SPTBN1-204ENST00000467371 ANAPC15P60006 121 aa10.58□□□□□ -0.72
SPTBN1-204ENST00000467371 ATF5Q9Y2D1 282 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-204ENST00000467371 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-204ENST00000467371 SPATA32Q96LK8 384 aa10.58□□□□□ -0.72
SPTBN1-204ENST00000467371 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
SPTBN1-204ENST00000467371 FBXW7Q969H0 707 aa10.57□□□□□ -0.72
SPTBN1-204ENST00000467371 UNCXA6NJT0 531 aa10.57□□□□□ -0.72
SPTBN1-204ENST00000467371 WDR70Q9NW82 654 aa10.57□□□□□ -0.72
SPTBN1-204ENST00000467371 SUPT16HQ9Y5B9 1047 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-204ENST00000467371 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
SPTBN1-204ENST00000467371 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-204ENST00000467371 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-204ENST00000467371 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 MCCP23508 829 aa10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 FLIIQ13045 1269 aa10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 DNAJC2Q99543 621 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-204ENST00000467371 BRD1O95696 1058 aa10.52□□□□□ -0.73
SPTBN1-204ENST00000467371 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
SPTBN1-204ENST00000467371 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.73
SPTBN1-204ENST00000467371 RNF216Q9NWF9 866 aaPredicted RBP10.52□□□□□ -0.73
SPTBN1-204ENST00000467371 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
SPTBN1-204ENST00000467371 PTMSP20962 102 aa10.5□□□□□ -0.73
SPTBN1-204ENST00000467371 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
SPTBN1-204ENST00000467371 KDM4CQ9H3R0 1056 aa10.48□□□□□ -0.73
SPTBN1-204ENST00000467371 YTHDC1Q96MU7 727 aaKnown RBP10.48□□□□□ -0.73
SPTBN1-204ENST00000467371 SGSM3Q96HU1 749 aa10.48□□□□□ -0.73
SPTBN1-204ENST00000467371 GPATCH11Q8N954 259 aa10.47□□□□□ -0.73
SPTBN1-204ENST00000467371 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.73
SPTBN1-204ENST00000467371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.73
SPTBN1-204ENST00000467371 MIER1Q8N108 512 aa10.45□□□□□ -0.74
SPTBN1-204ENST00000467371 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-204ENST00000467371 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
SPTBN1-204ENST00000467371 KCNG1Q9UIX4 513 aa10.44□□□□□ -0.74
SPTBN1-204ENST00000467371 SIRT1Q96EB6 747 aa10.43□□□□□ -0.74
SPTBN1-204ENST00000467371 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-204ENST00000467371 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
SPTBN1-204ENST00000467371 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-204ENST00000467371 MARCH6O60337 910 aa10.43□□□□□ -0.74
SPTBN1-204ENST00000467371 SERPINA10Q9UK55 444 aa10.42□□□□□ -0.74
SPTBN1-204ENST00000467371 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
SPTBN1-204ENST00000467371 SUGT1Q9Y2Z0 365 aa10.41□□□□□ -0.74
SPTBN1-204ENST00000467371 PPME1Q9Y570 386 aa10.4□□□□□ -0.74
SPTBN1-204ENST00000467371 SPTY2D1Q68D10 685 aaPredicted RBP10.4□□□□□ -0.74
SPTBN1-204ENST00000467371 SLC52A1Q9NWF4 448 aa10.4□□□□□ -0.74
SPTBN1-204ENST00000467371 NAP1L2Q9ULW6 460 aaPredicted RBP10.4□□□□□ -0.74
SPTBN1-204ENST00000467371 ERICH6BQ5W0A0 696 aa10.38□□□□□ -0.75
SPTBN1-204ENST00000467371 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-204ENST00000467371 WWC1Q8IX03 1113 aa10.38□□□□□ -0.75
SPTBN1-204ENST00000467371 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
SPTBN1-204ENST00000467371 NACADO15069 1562 aa10.37□□□□□ -0.75
SPTBN1-204ENST00000467371 TPD52L2O43399 206 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-204ENST00000467371 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-204ENST00000467371 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-204ENST00000467371 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
SPTBN1-204ENST00000467371 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-204ENST00000467371 NME8Q8N427 588 aa10.34□□□□□ -0.75
SPTBN1-204ENST00000467371 AK7Q96M32 723 aa10.34□□□□□ -0.75
SPTBN1-204ENST00000467371 RBM19Q9Y4C8 960 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-204ENST00000467371 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-204ENST00000467371 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-204ENST00000467371 KIAA1522Q9P206 1035 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-204ENST00000467371 MSH5O43196 834 aa10.33□□□□□ -0.76
SPTBN1-204ENST00000467371 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-204ENST00000467371 NEFMP07197 916 aa10.33□□□□□ -0.76
SPTBN1-204ENST00000467371 KCNA1Q09470 495 aa10.32□□□□□ -0.76
SPTBN1-204ENST00000467371 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-204ENST00000467371 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
SPTBN1-204ENST00000467371 ANKRD62A6NC57 917 aa10.32□□□□□ -0.76
SPTBN1-204ENST00000467371 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
SPTBN1-204ENST00000467371 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
SPTBN1-204ENST00000467371 RBM27Q9P2N5 1060 aaKnown RBP10.3□□□□□ -0.76
SPTBN1-204ENST00000467371 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
SPTBN1-204ENST00000467371 WIZO95785 1651 aa10.29□□□□□ -0.76
SPTBN1-204ENST00000467371 TERF2IPQ9NYB0 399 aa10.29□□□□□ -0.76
SPTBN1-204ENST00000467371 RNF25Q96BH1 459 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-204ENST00000467371 PTMAP06454 111 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 MCCD1P59942 119 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 MICAL1Q8TDZ2 1067 aa10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 FANCIQ9NVI1 1328 aa10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 PROSER2Q86WR7 435 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-204ENST00000467371 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms