RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 E2F4Q16254 413 aa12.93□□□□□ -0.34
EIF3A-202ENST00000462527 KRI1Q8N9T8 703 aaKnown RBP12.93□□□□□ -0.34
EIF3A-202ENST00000462527 TRAIPQ9BWF2 469 aa12.93□□□□□ -0.34
EIF3A-202ENST00000462527 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
EIF3A-202ENST00000462527 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
EIF3A-202ENST00000462527 NUBP1P53384 320 aa12.88□□□□□ -0.35
EIF3A-202ENST00000462527 GABBR2O75899 941 aa12.85□□□□□ -0.35
EIF3A-202ENST00000462527 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
EIF3A-202ENST00000462527 BICRAQ9NZM4 1560 aa12.85□□□□□ -0.35
EIF3A-202ENST00000462527 A6NJR5 290 aa12.84□□□□□ -0.35
EIF3A-202ENST00000462527 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
EIF3A-202ENST00000462527 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
EIF3A-202ENST00000462527 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
EIF3A-202ENST00000462527 IGSF3O75054 1194 aa12.83□□□□□ -0.36
EIF3A-202ENST00000462527 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
EIF3A-202ENST00000462527 TRAK2O60296 914 aa12.82□□□□□ -0.36
EIF3A-202ENST00000462527 PDE4DQ08499 809 aa12.81□□□□□ -0.36
EIF3A-202ENST00000462527 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
EIF3A-202ENST00000462527 TRIM66O15016 1216 aa12.78□□□□□ -0.36
EIF3A-202ENST00000462527 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
EIF3A-202ENST00000462527 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
EIF3A-202ENST00000462527 CDK11BP21127 795 aaKnown RBP12.78□□□□□ -0.36
EIF3A-202ENST00000462527 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
EIF3A-202ENST00000462527 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
EIF3A-202ENST00000462527 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
EIF3A-202ENST00000462527 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
EIF3A-202ENST00000462527 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
EIF3A-202ENST00000462527 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
EIF3A-202ENST00000462527 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
EIF3A-202ENST00000462527 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
EIF3A-202ENST00000462527 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
EIF3A-202ENST00000462527 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
EIF3A-202ENST00000462527 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
EIF3A-202ENST00000462527 FAM117AQ9C073 453 aa12.71□□□□□ -0.37
EIF3A-202ENST00000462527 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
EIF3A-202ENST00000462527 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
EIF3A-202ENST00000462527 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
EIF3A-202ENST00000462527 E9PSI1 815 aa12.68□□□□□ -0.38
EIF3A-202ENST00000462527 CLUAP1Q96AJ1 413 aa12.68□□□□□ -0.38
EIF3A-202ENST00000462527 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
EIF3A-202ENST00000462527 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
EIF3A-202ENST00000462527 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
EIF3A-202ENST00000462527 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
EIF3A-202ENST00000462527 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
EIF3A-202ENST00000462527 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
EIF3A-202ENST00000462527 CCDC61Q9Y6R9 512 aa12.63□□□□□ -0.39
EIF3A-202ENST00000462527 RBM26Q5T8P6 1007 aaKnown RBP12.61□□□□□ -0.39
EIF3A-202ENST00000462527 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
EIF3A-202ENST00000462527 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
EIF3A-202ENST00000462527 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
EIF3A-202ENST00000462527 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
EIF3A-202ENST00000462527 CLCN6P51797 869 aa12.59□□□□□ -0.39
EIF3A-202ENST00000462527 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
EIF3A-202ENST00000462527 PDE4CQ08493 712 aa12.57□□□□□ -0.4
EIF3A-202ENST00000462527 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
EIF3A-202ENST00000462527 PYGBP11216 843 aa12.56□□□□□ -0.4
EIF3A-202ENST00000462527 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
EIF3A-202ENST00000462527 PROSER2Q86WR7 435 aaPredicted RBP12.55□□□□□ -0.4
EIF3A-202ENST00000462527 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
EIF3A-202ENST00000462527 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
EIF3A-202ENST00000462527 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
EIF3A-202ENST00000462527 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
EIF3A-202ENST00000462527 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
EIF3A-202ENST00000462527 MAP3K13O43283 966 aa12.51□□□□□ -0.41
EIF3A-202ENST00000462527 PDE4AP27815 886 aa12.51□□□□□ -0.41
EIF3A-202ENST00000462527 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
EIF3A-202ENST00000462527 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
EIF3A-202ENST00000462527 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
EIF3A-202ENST00000462527 MCM6Q14566 821 aa12.47□□□□□ -0.41
EIF3A-202ENST00000462527 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
EIF3A-202ENST00000462527 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.41
EIF3A-202ENST00000462527 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
EIF3A-202ENST00000462527 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
EIF3A-202ENST00000462527 EIF4G1Q04637 1599 aaKnown RBP12.46□□□□□ -0.42
EIF3A-202ENST00000462527 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
EIF3A-202ENST00000462527 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
EIF3A-202ENST00000462527 IRF5Q13568 498 aa12.45□□□□□ -0.42
EIF3A-202ENST00000462527 PPP1R37O75864 691 aa12.44□□□□□ -0.42
EIF3A-202ENST00000462527 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
EIF3A-202ENST00000462527 MFSD10Q14728 455 aa12.43□□□□□ -0.42
EIF3A-202ENST00000462527 AMHR2Q16671 573 aa12.42□□□□□ -0.42
EIF3A-202ENST00000462527 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
EIF3A-202ENST00000462527 AMOTL2Q9Y2J4 779 aa12.42□□□□□ -0.42
EIF3A-202ENST00000462527 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
EIF3A-202ENST00000462527 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
EIF3A-202ENST00000462527 NLRP6P59044 892 aa12.4□□□□□ -0.42
EIF3A-202ENST00000462527 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
EIF3A-202ENST00000462527 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
EIF3A-202ENST00000462527 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
EIF3A-202ENST00000462527 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
EIF3A-202ENST00000462527 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
EIF3A-202ENST00000462527 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
EIF3A-202ENST00000462527 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
EIF3A-202ENST00000462527 ASTLQ6HA08 431 aaPredicted RBP12.36□□□□□ -0.43
EIF3A-202ENST00000462527 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
EIF3A-202ENST00000462527 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
EIF3A-202ENST00000462527 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
EIF3A-202ENST00000462527 KCNA1Q09470 495 aa12.35□□□□□ -0.43
EIF3A-202ENST00000462527 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
EIF3A-202ENST00000462527 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms