RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 CDK11AQ9UQ88 783 aaPredicted RBP28.47■■■□□ 2.15
CSPG5-203ENST00000456150 KDM6BO15054 1643 aa28.46■■■□□ 2.15
CSPG5-203ENST00000456150 DNMT1P26358 1616 aaKnown RBP28.46■■■□□ 2.15
CSPG5-203ENST00000456150 ROCK1Q13464 1354 aa28.45■■■□□ 2.15
CSPG5-203ENST00000456150 KDM5BQ9UGL1 1544 aa28.45■■■□□ 2.14
CSPG5-203ENST00000456150 DAPK1P53355 1430 aa28.44■■■□□ 2.14
CSPG5-203ENST00000456150 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
CSPG5-203ENST00000456150 DENND4BO75064 1496 aaPredicted RBP28.42■■■□□ 2.14
CSPG5-203ENST00000456150 ATP10BO94823 1461 aa28.41■■■□□ 2.14
CSPG5-203ENST00000456150 HIRIP3Q9BW71 556 aaPredicted RBP28.38■■■□□ 2.13
CSPG5-203ENST00000456150 ITSN2Q9NZM3 1697 aa28.37■■■□□ 2.13
CSPG5-203ENST00000456150 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
CSPG5-203ENST00000456150 ABCC5O15440 1437 aa28.36■■■□□ 2.13
CSPG5-203ENST00000456150 KCNH8Q96L42 1107 aa28.34■■■□□ 2.13
CSPG5-203ENST00000456150 MPHOSPH9Q99550 1183 aa28.34■■■□□ 2.13
CSPG5-203ENST00000456150 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
CSPG5-203ENST00000456150 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
CSPG5-203ENST00000456150 ANP32CO43423 234 aa28.33■■■□□ 2.13
CSPG5-203ENST00000456150 ABCC2Q92887 1545 aa28.31■■■□□ 2.12
CSPG5-203ENST00000456150 ADGBQ8N7X0 1667 aa28.26■■■□□ 2.11
CSPG5-203ENST00000456150 CAMSAP2Q08AD1 1489 aa28.26■■■□□ 2.11
CSPG5-203ENST00000456150 KIF14Q15058 1648 aa28.26■■■□□ 2.11
CSPG5-203ENST00000456150 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
CSPG5-203ENST00000456150 SUPT16HQ9Y5B9 1047 aaKnown RBP28.25■■■□□ 2.11
CSPG5-203ENST00000456150 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
CSPG5-203ENST00000456150 GPATCH8Q9UKJ3 1502 aaKnown RBP28.21■■■□□ 2.11
CSPG5-203ENST00000456150 UHRF1BP1LA0JNW5 1464 aa28.2■■■□□ 2.11
CSPG5-203ENST00000456150 CROCC2H7BZ55 1655 aa28.2■■■□□ 2.11
CSPG5-203ENST00000456150 ANKRD30BQ9BXX2 1392 aa28.2■■■□□ 2.1
CSPG5-203ENST00000456150 CFDP1Q9UEE9 299 aaPredicted RBP28.2■■■□□ 2.1
CSPG5-203ENST00000456150 RPRD2Q5VT52 1461 aaKnown RBP28.19■■■□□ 2.1
CSPG5-203ENST00000456150 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
CSPG5-203ENST00000456150 ZCCHC11Q5TAX3 1644 aaKnown RBP28.16■■■□□ 2.1
CSPG5-203ENST00000456150 HSPA5P11021 654 aaKnown RBP28.14■■■□□ 2.1
CSPG5-203ENST00000456150 EIF4G2P78344 907 aaKnown RBP eCLIP28.14■■■□□ 2.1
CSPG5-203ENST00000456150 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.1
CSPG5-203ENST00000456150 NCOA1Q15788 1441 aa28.13■■■□□ 2.09
CSPG5-203ENST00000456150 FOXD1Q16676 465 aa28.11■■■□□ 2.09
CSPG5-203ENST00000456150 SLC4A1APQ9BWU0 796 aaKnown RBP28.11■■■□□ 2.09
CSPG5-203ENST00000456150 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
CSPG5-203ENST00000456150 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
CSPG5-203ENST00000456150 CDC42BPAQ5VT25 1732 aa28.09■■■□□ 2.09
CSPG5-203ENST00000456150 PZPP20742 1482 aa28.08■■■□□ 2.09
CSPG5-203ENST00000456150 WASHC2AQ641Q2 1341 aa28.06■■■□□ 2.08
CSPG5-203ENST00000456150 ANKRD30AQ9BXX3 1397 aa28.06■■■□□ 2.08
CSPG5-203ENST00000456150 ZNF777Q9ULD5 760 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-203ENST00000456150 SHANK2Q9UPX8 1470 aa28.03■■■□□ 2.08
CSPG5-203ENST00000456150 CNTLNQ9NXG0 1405 aa27.99■■■□□ 2.07
CSPG5-203ENST00000456150 KIAA1107Q9UPP5 1409 aa27.99■■■□□ 2.07
CSPG5-203ENST00000456150 POLR1AO95602 1720 aaPredicted RBP27.98■■■□□ 2.07
CSPG5-203ENST00000456150 TTC37Q6PGP7 1564 aa27.97■■■□□ 2.07
CSPG5-203ENST00000456150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.97■■■□□ 2.07
CSPG5-203ENST00000456150 ANKRD50Q9ULJ7 1429 aa27.95■■■□□ 2.06
CSPG5-203ENST00000456150 NBPF8Q3BBV2 869 aa27.95■■■□□ 2.06
CSPG5-203ENST00000456150 CCDC7Q96M83 1385 aa27.93■■■□□ 2.06
CSPG5-203ENST00000456150 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
CSPG5-203ENST00000456150 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
CSPG5-203ENST00000456150 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
CSPG5-203ENST00000456150 C9orf84Q5VXU9 1444 aa27.92■■■□□ 2.06
CSPG5-203ENST00000456150 ARHGEF5Q12774 1597 aa27.91■■■□□ 2.06
CSPG5-203ENST00000456150 CDC42BPBQ9Y5S2 1711 aa27.9■■■□□ 2.06
CSPG5-203ENST00000456150 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
CSPG5-203ENST00000456150 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
CSPG5-203ENST00000456150 PREX2Q70Z35 1606 aa27.89■■■□□ 2.06
CSPG5-203ENST00000456150 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
CSPG5-203ENST00000456150 KDM5DQ9BY66 1539 aa27.87■■■□□ 2.05
CSPG5-203ENST00000456150 NEFLP07196 543 aa27.87■■■□□ 2.05
CSPG5-203ENST00000456150 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
CSPG5-203ENST00000456150 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
CSPG5-203ENST00000456150 PKD2Q13563 968 aa27.85■■■□□ 2.05
CSPG5-203ENST00000456150 TSPY4P0CV99 314 aa27.84■■■□□ 2.05
CSPG5-203ENST00000456150 TSPY10P0CW01 314 aa27.84■■■□□ 2.05
CSPG5-203ENST00000456150 FKBP8Q14318 412 aa27.84■■■□□ 2.05
CSPG5-203ENST00000456150 NPM1P06748 294 aaKnown RBP eCLIP27.83■■■□□ 2.05
CSPG5-203ENST00000456150 C11orf95C9JLR9 678 aaPredicted RBP27.82■■■□□ 2.04
CSPG5-203ENST00000456150 MYO5CQ9NQX4 1742 aa27.82■■■□□ 2.04
CSPG5-203ENST00000456150 SAMD9LQ8IVG5 1584 aa27.81■■■□□ 2.04
CSPG5-203ENST00000456150 ARHGAP5Q13017 1502 aa27.81■■■□□ 2.04
CSPG5-203ENST00000456150 NUP155O75694 1391 aa27.79■■■□□ 2.04
CSPG5-203ENST00000456150 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
CSPG5-203ENST00000456150 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.04
CSPG5-203ENST00000456150 KIF7Q2M1P5 1343 aa27.77■■■□□ 2.04
CSPG5-203ENST00000456150 KIF15Q9NS87 1388 aa27.76■■■□□ 2.04
CSPG5-203ENST00000456150 PLCH2O75038 1416 aa27.76■■■□□ 2.03
CSPG5-203ENST00000456150 HNRNPUQ00839 825 aaKnown RBP eCLIP27.76■■■□□ 2.03
CSPG5-203ENST00000456150 ARHGEF12Q9NZN5 1544 aa27.75■■■□□ 2.03
CSPG5-203ENST00000456150 PRKRIP1Q9H875 184 aaPredicted RBP27.75■■■□□ 2.03
CSPG5-203ENST00000456150 RSPH4AQ5TD94 716 aa27.74■■■□□ 2.03
CSPG5-203ENST00000456150 UHRF1BP1Q6BDS2 1440 aa27.73■■■□□ 2.03
CSPG5-203ENST00000456150 ABCA9Q8IUA7 1624 aa27.7■■■□□ 2.03
CSPG5-203ENST00000456150 USP47Q96K76 1375 aa27.7■■■□□ 2.03
CSPG5-203ENST00000456150 KDM5CP41229 1560 aa27.7■■■□□ 2.03
CSPG5-203ENST00000456150 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.02
CSPG5-203ENST00000456150 BCANQ96GW7 911 aa27.69■■■□□ 2.02
CSPG5-203ENST00000456150 RALGAPBQ86X10 1494 aa27.69■■■□□ 2.02
CSPG5-203ENST00000456150 MAST1Q9Y2H9 1570 aa27.67■■■□□ 2.02
CSPG5-203ENST00000456150 ARID4BQ4LE39 1312 aaPredicted RBP27.67■■■□□ 2.02
CSPG5-203ENST00000456150 EFCAB2Q5VUJ9 269 aa27.65■■■□□ 2.02
CSPG5-203ENST00000456150 BCORL1Q5H9F3 1711 aa27.65■■■□□ 2.02
CSPG5-203ENST00000456150 TSHZ2Q9NRE2 1034 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms