RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
RIF1-204ENST00000430328 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
RIF1-204ENST00000430328 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
RIF1-204ENST00000430328 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
RIF1-204ENST00000430328 RASSF8Q8NHQ8 419 aa20.66■□□□□ 0.9
RIF1-204ENST00000430328 HMMRO75330 724 aa20.65■□□□□ 0.9
RIF1-204ENST00000430328 MAP7D2Q96T17 732 aa20.61■□□□□ 0.89
RIF1-204ENST00000430328 SLKQ9H2G2 1235 aaPredicted RBP20.61■□□□□ 0.89
RIF1-204ENST00000430328 KRI1Q8N9T8 703 aaKnown RBP20.6■□□□□ 0.89
RIF1-204ENST00000430328 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
RIF1-204ENST00000430328 PES1O00541 588 aaKnown RBP20.59■□□□□ 0.89
RIF1-204ENST00000430328 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
RIF1-204ENST00000430328 RBM19Q9Y4C8 960 aaKnown RBP20.58■□□□□ 0.89
RIF1-204ENST00000430328 TPM1P09493 284 aa20.58■□□□□ 0.89
RIF1-204ENST00000430328 TPD52L1Q16890 204 aaPredicted RBP20.58■□□□□ 0.88
RIF1-204ENST00000430328 CCDC191Q8NCU4 936 aa20.56■□□□□ 0.88
RIF1-204ENST00000430328 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
RIF1-204ENST00000430328 GOLGA6L19H0YKK7 550 aa20.54■□□□□ 0.88
RIF1-204ENST00000430328 TPM2P07951 284 aa20.54■□□□□ 0.88
RIF1-204ENST00000430328 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
RIF1-204ENST00000430328 CDR1P51861 262 aa20.53■□□□□ 0.88
RIF1-204ENST00000430328 RDXP35241 583 aaKnown RBP20.51■□□□□ 0.87
RIF1-204ENST00000430328 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
RIF1-204ENST00000430328 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
RIF1-204ENST00000430328 AK7Q96M32 723 aa20.5■□□□□ 0.87
RIF1-204ENST00000430328 GPATCH3Q96I76 525 aa20.5■□□□□ 0.87
RIF1-204ENST00000430328 RUFY1Q96T51 708 aa20.5■□□□□ 0.87
RIF1-204ENST00000430328 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
RIF1-204ENST00000430328 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
RIF1-204ENST00000430328 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
RIF1-204ENST00000430328 IPO8O15397 1037 aaKnown RBP20.47■□□□□ 0.87
RIF1-204ENST00000430328 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
RIF1-204ENST00000430328 IPO7O95373 1038 aaKnown RBP20.46■□□□□ 0.87
RIF1-204ENST00000430328 APBB1O00213 710 aa20.46■□□□□ 0.87
RIF1-204ENST00000430328 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.46■□□□□ 0.87
RIF1-204ENST00000430328 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
RIF1-204ENST00000430328 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
RIF1-204ENST00000430328 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
RIF1-204ENST00000430328 WWC1Q8IX03 1113 aa20.45■□□□□ 0.86
RIF1-204ENST00000430328 ZNF592Q92610 1267 aa20.45■□□□□ 0.86
RIF1-204ENST00000430328 MARCH6O60337 910 aa20.45■□□□□ 0.86
RIF1-204ENST00000430328 CWC15Q9P013 229 aaKnown RBP20.44■□□□□ 0.86
RIF1-204ENST00000430328 ACBD3Q9H3P7 528 aa20.44■□□□□ 0.86
RIF1-204ENST00000430328 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
RIF1-204ENST00000430328 MTUS2Q5JR59 1369 aa20.43■□□□□ 0.86
RIF1-204ENST00000430328 BECN2A8MW95 431 aa20.43■□□□□ 0.86
RIF1-204ENST00000430328 H0YHG0 523 aa20.43■□□□□ 0.86
RIF1-204ENST00000430328 VPS53Q5VIR6 699 aa20.43■□□□□ 0.86
RIF1-204ENST00000430328 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
RIF1-204ENST00000430328 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
RIF1-204ENST00000430328 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
RIF1-204ENST00000430328 GORABQ5T7V8 394 aa20.4■□□□□ 0.86
RIF1-204ENST00000430328 FAM13BQ9NYF5 915 aa20.4■□□□□ 0.86
RIF1-204ENST00000430328 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
RIF1-204ENST00000430328 RWDD1Q9H446 243 aaPredicted RBP20.4■□□□□ 0.86
RIF1-204ENST00000430328 ST18O60284 1047 aa20.39■□□□□ 0.86
RIF1-204ENST00000430328 TRIM6-TRIM34B2RNG4 842 aa20.39■□□□□ 0.85
RIF1-204ENST00000430328 POGKQ9P215 609 aa20.39■□□□□ 0.85
RIF1-204ENST00000430328 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
RIF1-204ENST00000430328 IPO9Q96P70 1041 aaKnown RBP20.38■□□□□ 0.85
RIF1-204ENST00000430328 ARGLU1Q9NWB6 273 aaPredicted RBP20.37■□□□□ 0.85
RIF1-204ENST00000430328 HOMER1Q86YM7 354 aa20.37■□□□□ 0.85
RIF1-204ENST00000430328 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
RIF1-204ENST00000430328 H3BQV1 296 aa20.36■□□□□ 0.85
RIF1-204ENST00000430328 IFFO2Q5TF58 517 aa20.36■□□□□ 0.85
RIF1-204ENST00000430328 PLCD4Q9BRC7 762 aa20.35■□□□□ 0.85
RIF1-204ENST00000430328 ANKRD20A12PQ8NF67 263 aa20.34■□□□□ 0.85
RIF1-204ENST00000430328 SKOR2Q2VWA4 1001 aaPredicted RBP20.34■□□□□ 0.85
RIF1-204ENST00000430328 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
RIF1-204ENST00000430328 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
RIF1-204ENST00000430328 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.85
RIF1-204ENST00000430328 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
RIF1-204ENST00000430328 CCDC66A2RUB6 948 aa20.33■□□□□ 0.85
RIF1-204ENST00000430328 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
RIF1-204ENST00000430328 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
RIF1-204ENST00000430328 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
RIF1-204ENST00000430328 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
RIF1-204ENST00000430328 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
RIF1-204ENST00000430328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.3■□□□□ 0.842e-8■■■■■ 177.7
RIF1-204ENST00000430328 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
RIF1-204ENST00000430328 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
RIF1-204ENST00000430328 MTERF4Q7Z6M4 381 aaKnown RBP20.29■□□□□ 0.84
RIF1-204ENST00000430328 ZRSR2Q15696 482 aaKnown RBP20.29■□□□□ 0.84
RIF1-204ENST00000430328 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
RIF1-204ENST00000430328 FOXD4L1Q9NU39 408 aa20.28■□□□□ 0.84
RIF1-204ENST00000430328 HDAC5Q9UQL6 1122 aa20.28■□□□□ 0.84
RIF1-204ENST00000430328 ODF2Q5BJF6 829 aa20.28■□□□□ 0.84
RIF1-204ENST00000430328 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
RIF1-204ENST00000430328 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
RIF1-204ENST00000430328 TCEAL9Q9UHQ7 104 aa20.27■□□□□ 0.84
RIF1-204ENST00000430328 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
RIF1-204ENST00000430328 MEX3CQ5U5Q3 659 aaKnown RBP20.26■□□□□ 0.83
RIF1-204ENST00000430328 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
RIF1-204ENST00000430328 HOOK1Q9UJC3 728 aaKnown RBP20.25■□□□□ 0.83
RIF1-204ENST00000430328 GSE1Q14687 1217 aa20.25■□□□□ 0.83
RIF1-204ENST00000430328 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
RIF1-204ENST00000430328 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
RIF1-204ENST00000430328 G3V3G9 751 aa20.25■□□□□ 0.83
RIF1-204ENST00000430328 AKAP17AQ02040 695 aaKnown RBP20.25■□□□□ 0.83
RIF1-204ENST00000430328 DCAF8Q5TAQ9 597 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms