RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
R3HDM1-204ENST00000410054 CHAF1AQ13111 956 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-204ENST00000410054 IGSF3O75054 1194 aa6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 RBM26Q5T8P6 1007 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 GOLGA6L3A6NEY3 463 aa6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 PAF1Q8N7H5 531 aa6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 ISY1Q9ULR0 285 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 TCERG1O14776 1098 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-204ENST00000410054 KDM4AO75164 1064 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 CERS3Q8IU89 383 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 KIAA2012Q0VF49 1180 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 HSP90AB4PQ58FF6 505 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
R3HDM1-204ENST00000410054 NAP1L1P55209 391 aaKnown RBP6.71□□□□□ -1.33
R3HDM1-204ENST00000410054 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.33
R3HDM1-204ENST00000410054 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
R3HDM1-204ENST00000410054 MAP7D2Q96T17 732 aa6.71□□□□□ -1.34
R3HDM1-204ENST00000410054 HMGN5P82970 282 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 RBM28Q9NW13 759 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 PHF14O94880 888 aa6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 PHF23Q9BUL5 403 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 NRDCO43847 1150 aa6.7□□□□□ -1.34
R3HDM1-204ENST00000410054 GZF1Q9H116 711 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-204ENST00000410054 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-204ENST00000410054 FOSBP53539 338 aa6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 SUDS3Q9H7L9 328 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 CCDC27Q2M243 656 aa6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 TMCO5BA8MYB1 307 aa6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 MPHOSPH10O00566 681 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-204ENST00000410054 PES1O00541 588 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-204ENST00000410054 ZNF771Q7L3S4 317 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-204ENST00000410054 TRIM41Q8WV44 630 aa6.67□□□□□ -1.34
R3HDM1-204ENST00000410054 CCDC97Q96F63 343 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-204ENST00000410054 CCDC66A2RUB6 948 aa6.66□□□□□ -1.34
R3HDM1-204ENST00000410054 GOLIM4O00461 696 aa6.66□□□□□ -1.34
R3HDM1-204ENST00000410054 ARMCX6Q7L4S7 300 aa6.66□□□□□ -1.34
R3HDM1-204ENST00000410054 PLEKHD1A6NEE1 506 aa6.65□□□□□ -1.34
R3HDM1-204ENST00000410054 SH3BP5O60239 455 aa6.65□□□□□ -1.34
R3HDM1-204ENST00000410054 SECISBP2LQ93073 1101 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-204ENST00000410054 UPF2Q9HAU5 1272 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-204ENST00000410054 SETSIPP0DME0 302 aa6.65□□□□□ -1.35
R3HDM1-204ENST00000410054 MTERF4Q7Z6M4 381 aaKnown RBP6.65□□□□□ -1.35
R3HDM1-204ENST00000410054 CREBRFQ8IUR6 639 aa6.65□□□□□ -1.35
R3HDM1-204ENST00000410054 TSHZ2Q9NRE2 1034 aa6.65□□□□□ -1.35
R3HDM1-204ENST00000410054 LMOD3Q0VAK6 560 aa6.64□□□□□ -1.35
R3HDM1-204ENST00000410054 MTMR7Q9Y216 660 aa6.64□□□□□ -1.35
R3HDM1-204ENST00000410054 HTATSF1O43719 755 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-204ENST00000410054 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-204ENST00000410054 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-204ENST00000410054 SH3BGRP55822 239 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-204ENST00000410054 TSPYL1Q9H0U9 437 aa6.63□□□□□ -1.35
R3HDM1-204ENST00000410054 SOX12O15370 315 aa6.63□□□□□ -1.35
R3HDM1-204ENST00000410054 WWC3Q9ULE0 1092 aa6.63□□□□□ -1.35
R3HDM1-204ENST00000410054 KDM2AQ9Y2K7 1162 aa6.63□□□□□ -1.35
R3HDM1-204ENST00000410054 NPHP1O15259 732 aa6.62□□□□□ -1.35
R3HDM1-204ENST00000410054 POLD1P28340 1107 aa6.62□□□□□ -1.35
R3HDM1-204ENST00000410054 FAM177A1Q8N128 213 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-204ENST00000410054 BANK1Q8NDB2 785 aa6.62□□□□□ -1.35
R3HDM1-204ENST00000410054 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
R3HDM1-204ENST00000410054 HSCBQ8IWL3 235 aa6.61□□□□□ -1.35
R3HDM1-204ENST00000410054 CCP110O43303 1012 aa6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 ZRSR2Q15696 482 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 HSP90AB3PQ58FF7 597 aa6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 MSNP26038 577 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 TDO2P48775 406 aa6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 MFAP1P55081 439 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-204ENST00000410054 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
R3HDM1-204ENST00000410054 CHGAP10645 457 aaKnown RBP6.59□□□□□ -1.36
R3HDM1-204ENST00000410054 HDAC1Q13547 482 aaPredicted RBP6.59□□□□□ -1.36
R3HDM1-204ENST00000410054 CCDC34Q96HJ3 373 aa6.59□□□□□ -1.36
R3HDM1-204ENST00000410054 ECM2O94769 699 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 PDILTQ8N807 584 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 FAM13BQ9NYF5 915 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 GPS2Q13227 327 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 ANKRD13AQ8IZ07 590 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 PIK3R5Q8WYR1 880 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 CFAP53Q96M91 514 aa6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 CGNQ9P2M7 1197 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-204ENST00000410054 IL27Q8NEV9 243 aa6.57□□□□□ -1.36
R3HDM1-204ENST00000410054 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
R3HDM1-204ENST00000410054 TERF2IPQ9NYB0 399 aa6.57□□□□□ -1.36
R3HDM1-204ENST00000410054 VGFO15240 615 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-204ENST00000410054 TNNT1P13805 278 aa6.57□□□□□ -1.36
R3HDM1-204ENST00000410054 TPM2P07951 284 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 SRPK2P78362 688 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 DDRGK1Q96HY6 314 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 RALBP1Q15311 655 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 DEF6Q9H4E7 631 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 RGS3P49796 1198 aa6.56□□□□□ -1.36
R3HDM1-204ENST00000410054 H0YHG0 523 aa6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 SARNPP82979 210 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms