RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
SMCO1-201ENST00000397537 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
SMCO1-201ENST00000397537 ZNF777Q9ULD5 760 aaPredicted RBP10.28□□□□□ -0.76
SMCO1-201ENST00000397537 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
SMCO1-201ENST00000397537 CC2D2AQ9P2K1 1620 aa10.27□□□□□ -0.76
SMCO1-201ENST00000397537 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
SMCO1-201ENST00000397537 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
SMCO1-201ENST00000397537 BRD2P25440 801 aaKnown RBP10.26□□□□□ -0.77
SMCO1-201ENST00000397537 E2F4Q16254 413 aa10.26□□□□□ -0.77
SMCO1-201ENST00000397537 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
SMCO1-201ENST00000397537 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
SMCO1-201ENST00000397537 NACADO15069 1562 aa10.25□□□□□ -0.77
SMCO1-201ENST00000397537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.25□□□□□ -0.77
SMCO1-201ENST00000397537 ZFP91Q96JP5 570 aaPredicted RBP10.25□□□□□ -0.77
SMCO1-201ENST00000397537 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
SMCO1-201ENST00000397537 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
SMCO1-201ENST00000397537 SGIP1Q9BQI5 828 aa10.23□□□□□ -0.77
SMCO1-201ENST00000397537 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
SMCO1-201ENST00000397537 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
SMCO1-201ENST00000397537 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
SMCO1-201ENST00000397537 SMYD5Q6GMV2 418 aa10.23□□□□□ -0.77
SMCO1-201ENST00000397537 CCDC97Q96F63 343 aaPredicted RBP10.21□□□□□ -0.77
SMCO1-201ENST00000397537 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
SMCO1-201ENST00000397537 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
SMCO1-201ENST00000397537 CUX2O14529 1486 aa10.18□□□□□ -0.78
SMCO1-201ENST00000397537 PROSER2Q86WR7 435 aaPredicted RBP10.17□□□□□ -0.78
SMCO1-201ENST00000397537 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
SMCO1-201ENST00000397537 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
SMCO1-201ENST00000397537 MCM6Q14566 821 aa10.15□□□□□ -0.78
SMCO1-201ENST00000397537 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
SMCO1-201ENST00000397537 UBE2Q2Q8WVN8 375 aa10.15□□□□□ -0.78
SMCO1-201ENST00000397537 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
SMCO1-201ENST00000397537 AMOTL2Q9Y2J4 779 aa10.15□□□□□ -0.78
SMCO1-201ENST00000397537 NUBP1P53384 320 aa10.14□□□□□ -0.79
SMCO1-201ENST00000397537 DCAF8Q5TAQ9 597 aa10.12□□□□□ -0.79
SMCO1-201ENST00000397537 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
SMCO1-201ENST00000397537 CCDC125Q86Z20 511 aa10.09□□□□□ -0.79
SMCO1-201ENST00000397537 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
SMCO1-201ENST00000397537 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
SMCO1-201ENST00000397537 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
SMCO1-201ENST00000397537 PPM1GO15355 546 aaPredicted RBP10.07□□□□□ -0.8
SMCO1-201ENST00000397537 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
SMCO1-201ENST00000397537 IGSF5Q9NSI5 407 aa10.07□□□□□ -0.8
SMCO1-201ENST00000397537 EIF4G1Q04637 1599 aaKnown RBP10.06□□□□□ -0.8
SMCO1-201ENST00000397537 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
SMCO1-201ENST00000397537 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
SMCO1-201ENST00000397537 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
SMCO1-201ENST00000397537 PATL2C9JE40 543 aaKnown RBP10.03□□□□□ -0.8
SMCO1-201ENST00000397537 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
SMCO1-201ENST00000397537 KCNA1Q09470 495 aa10.01□□□□□ -0.81
SMCO1-201ENST00000397537 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
SMCO1-201ENST00000397537 PARP9Q8IXQ6 854 aa10.01□□□□□ -0.81
SMCO1-201ENST00000397537 PPP1R15AO75807 674 aaPredicted RBP9.99□□□□□ -0.81
SMCO1-201ENST00000397537 BRD1O95696 1058 aa9.97□□□□□ -0.81
SMCO1-201ENST00000397537 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.82
SMCO1-201ENST00000397537 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.82
SMCO1-201ENST00000397537 PPP1R37O75864 691 aa9.95□□□□□ -0.82
SMCO1-201ENST00000397537 AMHR2Q16671 573 aa9.95□□□□□ -0.82
SMCO1-201ENST00000397537 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
SMCO1-201ENST00000397537 GPR37O15354 613 aa9.94□□□□□ -0.82
SMCO1-201ENST00000397537 PDE4CQ08493 712 aa9.94□□□□□ -0.82
SMCO1-201ENST00000397537 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
SMCO1-201ENST00000397537 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
SMCO1-201ENST00000397537 ACIN1Q9UKV3 1341 aaKnown RBP9.93□□□□□ -0.82
SMCO1-201ENST00000397537 HAX1O00165 279 aa9.93□□□□□ -0.82
SMCO1-201ENST00000397537 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
SMCO1-201ENST00000397537 CERS3Q8IU89 383 aa9.91□□□□□ -0.82
SMCO1-201ENST00000397537 CCDC102AQ96A19 550 aa9.91□□□□□ -0.82
SMCO1-201ENST00000397537 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMCO1-201ENST00000397537 COG6Q9Y2V7 657 aa9.91□□□□□ -0.82
SMCO1-201ENST00000397537 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
SMCO1-201ENST00000397537 SMARCA5O60264 1052 aaPredicted RBP9.89□□□□□ -0.83
SMCO1-201ENST00000397537 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
SMCO1-201ENST00000397537 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
SMCO1-201ENST00000397537 IVNS1ABPQ9Y6Y0 642 aa9.89□□□□□ -0.83
SMCO1-201ENST00000397537 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
SMCO1-201ENST00000397537 CANXP27824 592 aaKnown RBP9.89□□□□□ -0.83
SMCO1-201ENST00000397537 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
SMCO1-201ENST00000397537 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
SMCO1-201ENST00000397537 PYGBP11216 843 aa9.87□□□□□ -0.83
SMCO1-201ENST00000397537 SPDYE1Q8NFV5 336 aaPredicted RBP9.87□□□□□ -0.83
SMCO1-201ENST00000397537 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
SMCO1-201ENST00000397537 KIAA1522Q9P206 1035 aaPredicted RBP9.87□□□□□ -0.83
SMCO1-201ENST00000397537 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
SMCO1-201ENST00000397537 RBM47A0AV96 593 aaKnown RBP9.86□□□□□ -0.83
SMCO1-201ENST00000397537 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-201ENST00000397537 SPATA32Q96LK8 384 aa9.86□□□□□ -0.83
SMCO1-201ENST00000397537 ARID4BQ4LE39 1312 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-201ENST00000397537 CARNS1A5YM72 827 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 IRF6O14896 467 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 MFSD10Q14728 455 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 MS4A1P11836 297 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 LHX8Q68G74 356 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 BRPF3Q9ULD4 1205 aa9.84□□□□□ -0.83
SMCO1-201ENST00000397537 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
SMCO1-201ENST00000397537 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
SMCO1-201ENST00000397537 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
SMCO1-201ENST00000397537 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms