RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 PLEKHD1A6NEE1 506 aa28.81■■■□□ 2.2
RAB11FIP4-201ENST00000394744 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
RAB11FIP4-201ENST00000394744 KDM6BO15054 1643 aa28.79■■■□□ 2.2
RAB11FIP4-201ENST00000394744 ABCC2Q92887 1545 aa28.79■■■□□ 2.2
RAB11FIP4-201ENST00000394744 TIMELESSQ9UNS1 1208 aa28.79■■■□□ 2.2
RAB11FIP4-201ENST00000394744 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
RAB11FIP4-201ENST00000394744 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
RAB11FIP4-201ENST00000394744 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
RAB11FIP4-201ENST00000394744 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
RAB11FIP4-201ENST00000394744 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
RAB11FIP4-201ENST00000394744 ABCC10Q5T3U5 1492 aa28.73■■■□□ 2.19
RAB11FIP4-201ENST00000394744 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
RAB11FIP4-201ENST00000394744 ZNF777Q9ULD5 760 aaPredicted RBP28.7■■■□□ 2.19
RAB11FIP4-201ENST00000394744 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
RAB11FIP4-201ENST00000394744 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
RAB11FIP4-201ENST00000394744 MIER1Q8N108 512 aa28.66■■■□□ 2.18
RAB11FIP4-201ENST00000394744 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
RAB11FIP4-201ENST00000394744 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
RAB11FIP4-201ENST00000394744 TONSLQ96HA7 1378 aa28.64■■■□□ 2.18
RAB11FIP4-201ENST00000394744 ZCCHC11Q5TAX3 1644 aaKnown RBP28.63■■■□□ 2.17
RAB11FIP4-201ENST00000394744 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
RAB11FIP4-201ENST00000394744 CROCC2H7BZ55 1655 aa28.59■■■□□ 2.17
RAB11FIP4-201ENST00000394744 MPHOSPH9Q99550 1183 aa28.59■■■□□ 2.17
RAB11FIP4-201ENST00000394744 ADGBQ8N7X0 1667 aa28.59■■■□□ 2.17
RAB11FIP4-201ENST00000394744 NCOA1Q15788 1441 aa28.57■■■□□ 2.16
RAB11FIP4-201ENST00000394744 ADGRL2O95490 1459 aa28.57■■■□□ 2.16
RAB11FIP4-201ENST00000394744 ACIN1Q9UKV3 1341 aaKnown RBP28.56■■■□□ 2.16
RAB11FIP4-201ENST00000394744 CYB5RLQ6IPT4 315 aa28.55■■■□□ 2.16
RAB11FIP4-201ENST00000394744 ANKRD30AQ9BXX3 1397 aa28.5■■■□□ 2.15
RAB11FIP4-201ENST00000394744 SHANK2Q9UPX8 1470 aa28.48■■■□□ 2.15
RAB11FIP4-201ENST00000394744 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
RAB11FIP4-201ENST00000394744 FOXD1Q16676 465 aa28.46■■■□□ 2.15
RAB11FIP4-201ENST00000394744 C9orf84Q5VXU9 1444 aa28.45■■■□□ 2.15
RAB11FIP4-201ENST00000394744 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
RAB11FIP4-201ENST00000394744 TTC37Q6PGP7 1564 aa28.43■■■□□ 2.14
RAB11FIP4-201ENST00000394744 SAMD9LQ8IVG5 1584 aa28.43■■■□□ 2.14
RAB11FIP4-201ENST00000394744 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.145e-6■■■■□ 22
RAB11FIP4-201ENST00000394744 ARHGEF5Q12774 1597 aa28.42■■■□□ 2.14
RAB11FIP4-201ENST00000394744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.14
RAB11FIP4-201ENST00000394744 SLC4A1APQ9BWU0 796 aaKnown RBP28.42■■■□□ 2.14
RAB11FIP4-201ENST00000394744 MBD5Q9P267 1494 aa28.42■■■□□ 2.14
RAB11FIP4-201ENST00000394744 ANKRD30BQ9BXX2 1392 aa28.4■■■□□ 2.14
RAB11FIP4-201ENST00000394744 PZPP20742 1482 aa28.4■■■□□ 2.14
RAB11FIP4-201ENST00000394744 CENPBP07199 599 aaPredicted RBP28.39■■■□□ 2.14
RAB11FIP4-201ENST00000394744 TSPY4P0CV99 314 aa28.39■■■□□ 2.14
RAB11FIP4-201ENST00000394744 TSPY10P0CW01 314 aa28.39■■■□□ 2.14
RAB11FIP4-201ENST00000394744 ANKRD50Q9ULJ7 1429 aa28.39■■■□□ 2.14
RAB11FIP4-201ENST00000394744 ASXL2Q76L83 1435 aa28.37■■■□□ 2.13
RAB11FIP4-201ENST00000394744 WDR7Q9Y4E6 1490 aa28.36■■■□□ 2.13
RAB11FIP4-201ENST00000394744 ARHGAP5Q13017 1502 aa28.35■■■□□ 2.13
RAB11FIP4-201ENST00000394744 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
RAB11FIP4-201ENST00000394744 NPM1P06748 294 aaKnown RBP eCLIP28.35■■■□□ 2.13
RAB11FIP4-201ENST00000394744 KCNH8Q96L42 1107 aa28.34■■■□□ 2.13
RAB11FIP4-201ENST00000394744 YTHDC1Q96MU7 727 aaKnown RBP28.34■■■□□ 2.13
RAB11FIP4-201ENST00000394744 HIRIP3Q9BW71 556 aaPredicted RBP28.33■■■□□ 2.13
RAB11FIP4-201ENST00000394744 RPRD2Q5VT52 1461 aaKnown RBP28.32■■■□□ 2.12
RAB11FIP4-201ENST00000394744 MYO5CQ9NQX4 1742 aa28.31■■■□□ 2.12
RAB11FIP4-201ENST00000394744 SYCP2Q9BX26 1530 aa28.3■■■□□ 2.12
RAB11FIP4-201ENST00000394744 KIF15Q9NS87 1388 aa28.3■■■□□ 2.12
RAB11FIP4-201ENST00000394744 RSPH4AQ5TD94 716 aa28.3■■■□□ 2.12
RAB11FIP4-201ENST00000394744 L3MBTL2Q969R5 705 aa28.28■■■□□ 2.12
RAB11FIP4-201ENST00000394744 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
RAB11FIP4-201ENST00000394744 KIAA1107Q9UPP5 1409 aa28.26■■■□□ 2.11
RAB11FIP4-201ENST00000394744 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
RAB11FIP4-201ENST00000394744 DDX10Q13206 875 aaKnown RBP28.24■■■□□ 2.11
RAB11FIP4-201ENST00000394744 TEX14Q8IWB6 1497 aa28.23■■■□□ 2.11
RAB11FIP4-201ENST00000394744 PKD2Q13563 968 aa28.22■■■□□ 2.11
RAB11FIP4-201ENST00000394744 PLEKHH2Q8IVE3 1493 aa28.22■■■□□ 2.11
RAB11FIP4-201ENST00000394744 NUP155O75694 1391 aa28.22■■■□□ 2.11
RAB11FIP4-201ENST00000394744 PLCH2O75038 1416 aa28.22■■■□□ 2.11
RAB11FIP4-201ENST00000394744 KDM5DQ9BY66 1539 aa28.2■■■□□ 2.11
RAB11FIP4-201ENST00000394744 MAST1Q9Y2H9 1570 aa28.2■■■□□ 2.1
RAB11FIP4-201ENST00000394744 ABCA9Q8IUA7 1624 aa28.18■■■□□ 2.1
RAB11FIP4-201ENST00000394744 ARHGEF12Q9NZN5 1544 aa28.16■■■□□ 2.1
RAB11FIP4-201ENST00000394744 EFCAB2Q5VUJ9 269 aa28.15■■■□□ 2.1
RAB11FIP4-201ENST00000394744 NBPF8Q3BBV2 869 aa28.1■■■□□ 2.09
RAB11FIP4-201ENST00000394744 HSPA5P11021 654 aaKnown RBP28.1■■■□□ 2.09
RAB11FIP4-201ENST00000394744 PLXNC1O60486 1568 aa28.09■■■□□ 2.09
RAB11FIP4-201ENST00000394744 ABCC1P33527 1531 aa28.09■■■□□ 2.09
RAB11FIP4-201ENST00000394744 EIF4G2P78344 907 aaKnown RBP eCLIP28.06■■■□□ 2.08
RAB11FIP4-201ENST00000394744 DIP2BQ9P265 1576 aa28.05■■■□□ 2.08
RAB11FIP4-201ENST00000394744 ARAP3Q8WWN8 1544 aa28.05■■■□□ 2.08
RAB11FIP4-201ENST00000394744 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
RAB11FIP4-201ENST00000394744 TRAPPC8Q9Y2L5 1435 aa28.03■■■□□ 2.08
RAB11FIP4-201ENST00000394744 UNC13BO14795 1591 aa28.02■■■□□ 2.08
RAB11FIP4-201ENST00000394744 DUOX2Q9NRD8 1548 aa28■■■□□ 2.07
RAB11FIP4-201ENST00000394744 GLI2P10070 1586 aa28■■■□□ 2.07
RAB11FIP4-201ENST00000394744 MAP3K4Q9Y6R4 1608 aa27.99■■■□□ 2.07
RAB11FIP4-201ENST00000394744 CD109Q6YHK3 1445 aa27.99■■■□□ 2.07
RAB11FIP4-201ENST00000394744 GTF3C3Q9Y5Q9 886 aa27.97■■■□□ 2.07
RAB11FIP4-201ENST00000394744 FANCAO15360 1455 aa27.96■■■□□ 2.07
RAB11FIP4-201ENST00000394744 WASHC2AQ641Q2 1341 aa27.95■■■□□ 2.06
RAB11FIP4-201ENST00000394744 ERBINQ96RT1 1412 aa27.95■■■□□ 2.06
RAB11FIP4-201ENST00000394744 KIF13AQ9H1H9 1805 aa27.94■■■□□ 2.06
RAB11FIP4-201ENST00000394744 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
RAB11FIP4-201ENST00000394744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.94■■■□□ 2.061e-6■■□□□ 13.1
RAB11FIP4-201ENST00000394744 ANP32CO43423 234 aa27.91■■■□□ 2.06
RAB11FIP4-201ENST00000394744 SPAG9O60271 1321 aaKnown RBP27.9■■■□□ 2.06
RAB11FIP4-201ENST00000394744 IQGAP3Q86VI3 1631 aa27.9■■■□□ 2.06
RAB11FIP4-201ENST00000394744 AFAP1Q8N556 730 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms