RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 SUDS3Q9H7L9 328 aaPredicted RBP11.06□□□□□ -0.64
ABCA1-202ENST00000374736 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
ABCA1-202ENST00000374736 LIG1P18858 919 aa11.05□□□□□ -0.64
ABCA1-202ENST00000374736 TMCO5BA8MYB1 307 aa11.05□□□□□ -0.64
ABCA1-202ENST00000374736 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
ABCA1-202ENST00000374736 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.05□□□□□ -0.64
ABCA1-202ENST00000374736 RDXP35241 583 aaKnown RBP11.04□□□□□ -0.64
ABCA1-202ENST00000374736 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
ABCA1-202ENST00000374736 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
ABCA1-202ENST00000374736 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
ABCA1-202ENST00000374736 KIF20AO95235 890 aa11.02□□□□□ -0.64
ABCA1-202ENST00000374736 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.64
ABCA1-202ENST00000374736 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
ABCA1-202ENST00000374736 WDR78Q5VTH9 848 aa11.01□□□□□ -0.65
ABCA1-202ENST00000374736 SARNPP82979 210 aaKnown RBP11□□□□□ -0.65
ABCA1-202ENST00000374736 GBP4Q96PP9 640 aa11□□□□□ -0.65
ABCA1-202ENST00000374736 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
ABCA1-202ENST00000374736 MPHOSPH10O00566 681 aaKnown RBP10.99□□□□□ -0.65
ABCA1-202ENST00000374736 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
ABCA1-202ENST00000374736 PHF14O94880 888 aa10.99□□□□□ -0.65
ABCA1-202ENST00000374736 SYAP1Q96A49 352 aaPredicted RBP10.99□□□□□ -0.65
ABCA1-202ENST00000374736 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 EEA1Q15075 1411 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 FAM13BQ9NYF5 915 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 PDCL2Q8N4E4 241 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
ABCA1-202ENST00000374736 CNPY4Q8N129 248 aa10.98□□□□□ -0.65
ABCA1-202ENST00000374736 HSP90AB3PQ58FF7 597 aa10.97□□□□□ -0.65
ABCA1-202ENST00000374736 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
ABCA1-202ENST00000374736 CCP110O43303 1012 aa10.97□□□□□ -0.65
ABCA1-202ENST00000374736 AAMPQ13685 434 aa10.97□□□□□ -0.65
ABCA1-202ENST00000374736 GTPBP4Q9BZE4 634 aaKnown RBP10.97□□□□□ -0.65
ABCA1-202ENST00000374736 GOLGA6L10A6NI86 522 aa10.96□□□□□ -0.65
ABCA1-202ENST00000374736 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
ABCA1-202ENST00000374736 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
ABCA1-202ENST00000374736 CHIC1Q5VXU3 224 aa10.95□□□□□ -0.66
ABCA1-202ENST00000374736 CEP120Q8N960 986 aa10.95□□□□□ -0.66
ABCA1-202ENST00000374736 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
ABCA1-202ENST00000374736 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
ABCA1-202ENST00000374736 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
ABCA1-202ENST00000374736 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
ABCA1-202ENST00000374736 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
ABCA1-202ENST00000374736 TDO2P48775 406 aa10.93□□□□□ -0.66
ABCA1-202ENST00000374736 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
ABCA1-202ENST00000374736 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
ABCA1-202ENST00000374736 DYDC1Q8WWB3 177 aa10.92□□□□□ -0.66
ABCA1-202ENST00000374736 ITGAEP38570 1179 aa10.92□□□□□ -0.66
ABCA1-202ENST00000374736 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
ABCA1-202ENST00000374736 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
ABCA1-202ENST00000374736 DIAPH3Q9NSV4 1193 aa10.91□□□□□ -0.66
ABCA1-202ENST00000374736 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
ABCA1-202ENST00000374736 HSPA5P11021 654 aaKnown RBP10.91□□□□□ -0.66
ABCA1-202ENST00000374736 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
ABCA1-202ENST00000374736 HMMRO75330 724 aa10.91□□□□□ -0.66
ABCA1-202ENST00000374736 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
ABCA1-202ENST00000374736 RALBP1Q15311 655 aa10.9□□□□□ -0.66
ABCA1-202ENST00000374736 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
ABCA1-202ENST00000374736 GOLIM4O00461 696 aa10.9□□□□□ -0.66
ABCA1-202ENST00000374736 TRIM6-TRIM34B2RNG4 842 aa10.9□□□□□ -0.66
ABCA1-202ENST00000374736 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
ABCA1-202ENST00000374736 CAVIN1Q6NZI2 390 aaKnown RBP10.9□□□□□ -0.66
ABCA1-202ENST00000374736 MIER1Q8N108 512 aa10.9□□□□□ -0.67
ABCA1-202ENST00000374736 SWAP70Q9UH65 585 aa10.9□□□□□ -0.67
ABCA1-202ENST00000374736 AK7Q96M32 723 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 GIMAP7Q8NHV1 300 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 ACBD3Q9H3P7 528 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 TERF2IPQ9NYB0 399 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 CCDC191Q8NCU4 936 aa10.89□□□□□ -0.67
ABCA1-202ENST00000374736 H0YHG0 523 aa10.88□□□□□ -0.67
ABCA1-202ENST00000374736 CHMP4BQ9H444 224 aaKnown RBP10.88□□□□□ -0.67
ABCA1-202ENST00000374736 CCDC91Q7Z6B0 441 aa10.88□□□□□ -0.67
ABCA1-202ENST00000374736 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
ABCA1-202ENST00000374736 ZRSR2Q15696 482 aaKnown RBP10.87□□□□□ -0.67
ABCA1-202ENST00000374736 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
ABCA1-202ENST00000374736 DDX11Q96FC9 970 aa10.87□□□□□ -0.67
ABCA1-202ENST00000374736 ZNF592Q92610 1267 aa10.86□□□□□ -0.67
ABCA1-202ENST00000374736 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
ABCA1-202ENST00000374736 HDAC1Q13547 482 aaPredicted RBP10.86□□□□□ -0.67
ABCA1-202ENST00000374736 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 MRE11P49959 708 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 GTF2A1P52655 376 aaPredicted RBP10.85□□□□□ -0.67
ABCA1-202ENST00000374736 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 SEPT14Q6ZU15 432 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 CDR1P51861 262 aa10.85□□□□□ -0.67
ABCA1-202ENST00000374736 NAP1L1P55209 391 aaKnown RBP10.85□□□□□ -0.67
ABCA1-202ENST00000374736 ANAPC15P60006 121 aa10.84□□□□□ -0.67
ABCA1-202ENST00000374736 MYCBPQ99417 103 aaPredicted RBP10.84□□□□□ -0.67
ABCA1-202ENST00000374736 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
ABCA1-202ENST00000374736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.83□□□□□ -0.68
ABCA1-202ENST00000374736 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
ABCA1-202ENST00000374736 TPM4P67936 248 aa10.82□□□□□ -0.68
ABCA1-202ENST00000374736 HSCBQ8IWL3 235 aa10.82□□□□□ -0.68
ABCA1-202ENST00000374736 TPM3P06753 285 aa10.82□□□□□ -0.68
ABCA1-202ENST00000374736 KCNA4P22459 653 aa10.82□□□□□ -0.68
ABCA1-202ENST00000374736 SH3BGRP55822 239 aaPredicted RBP10.82□□□□□ -0.68
ABCA1-202ENST00000374736 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
ABCA1-202ENST00000374736 CREBRFQ8IUR6 639 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms