RNA–Protein interactions for RNA: ENST00000300181.6

TSC22D4-201, Transcript of TSC22 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D4, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-201ENST00000300181 SIN3AQ96ST3 1273 aa24.16■■□□□ 1.46
TSC22D4-201ENST00000300181 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
TSC22D4-201ENST00000300181 KDM6BO15054 1643 aa24.16■■□□□ 1.46
TSC22D4-201ENST00000300181 ABCC5O15440 1437 aa24.15■■□□□ 1.46
TSC22D4-201ENST00000300181 NEUROD1Q13562 356 aa24.14■■□□□ 1.46
TSC22D4-201ENST00000300181 ABCC10Q5T3U5 1492 aa24.13■■□□□ 1.45
TSC22D4-201ENST00000300181 ABCC2Q92887 1545 aa24.13■■□□□ 1.45
TSC22D4-201ENST00000300181 AKNAQ7Z591 1439 aa24.07■■□□□ 1.44
TSC22D4-201ENST00000300181 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
TSC22D4-201ENST00000300181 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
TSC22D4-201ENST00000300181 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
TSC22D4-201ENST00000300181 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
TSC22D4-201ENST00000300181 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
TSC22D4-201ENST00000300181 ROCK1Q13464 1354 aa24.01■■□□□ 1.43
TSC22D4-201ENST00000300181 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
TSC22D4-201ENST00000300181 TTC37Q6PGP7 1564 aa24.01■■□□□ 1.43
TSC22D4-201ENST00000300181 ADGBQ8N7X0 1667 aa24■■□□□ 1.43
TSC22D4-201ENST00000300181 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
TSC22D4-201ENST00000300181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.97■■□□□ 1.438e-8■■■□□ 16.7
TSC22D4-201ENST00000300181 UHRF1BP1LA0JNW5 1464 aa23.95■■□□□ 1.43
TSC22D4-201ENST00000300181 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.435e-8■□□□□ 11
TSC22D4-201ENST00000300181 OSCARQ8IYS5 282 aa23.95■■□□□ 1.43
TSC22D4-201ENST00000300181 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
TSC22D4-201ENST00000300181 NCOA1Q15788 1441 aa23.94■■□□□ 1.42
TSC22D4-201ENST00000300181 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
TSC22D4-201ENST00000300181 SAMD9LQ8IVG5 1584 aa23.93■■□□□ 1.42
TSC22D4-201ENST00000300181 MYO5CQ9NQX4 1742 aa23.91■■□□□ 1.42
TSC22D4-201ENST00000300181 FOXD1Q16676 465 aa23.91■■□□□ 1.42
TSC22D4-201ENST00000300181 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
TSC22D4-201ENST00000300181 ARHGAP5Q13017 1502 aa23.91■■□□□ 1.42
TSC22D4-201ENST00000300181 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
TSC22D4-201ENST00000300181 C9orf84Q5VXU9 1444 aa23.88■■□□□ 1.41
TSC22D4-201ENST00000300181 ANKRD30AQ9BXX3 1397 aa23.87■■□□□ 1.41
TSC22D4-201ENST00000300181 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
TSC22D4-201ENST00000300181 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
TSC22D4-201ENST00000300181 MBD5Q9P267 1494 aa23.86■■□□□ 1.41
TSC22D4-201ENST00000300181 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
TSC22D4-201ENST00000300181 SYCP2Q9BX26 1530 aa23.85■■□□□ 1.41
TSC22D4-201ENST00000300181 ARHGEF5Q12774 1597 aa23.84■■□□□ 1.41
TSC22D4-201ENST00000300181 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
TSC22D4-201ENST00000300181 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.4
TSC22D4-201ENST00000300181 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
TSC22D4-201ENST00000300181 PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
TSC22D4-201ENST00000300181 SLC4A1APQ9BWU0 796 aaKnown RBP23.81■■□□□ 1.4
TSC22D4-201ENST00000300181 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
TSC22D4-201ENST00000300181 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
TSC22D4-201ENST00000300181 MIER1Q8N108 512 aa23.77■■□□□ 1.4
TSC22D4-201ENST00000300181 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
TSC22D4-201ENST00000300181 PZPP20742 1482 aa23.75■■□□□ 1.39
TSC22D4-201ENST00000300181 PLCH2O75038 1416 aa23.75■■□□□ 1.39
TSC22D4-201ENST00000300181 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
TSC22D4-201ENST00000300181 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
TSC22D4-201ENST00000300181 ARHGEF12Q9NZN5 1544 aa23.73■■□□□ 1.39
TSC22D4-201ENST00000300181 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
TSC22D4-201ENST00000300181 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
TSC22D4-201ENST00000300181 ANKRD30BQ9BXX2 1392 aa23.7■■□□□ 1.38
TSC22D4-201ENST00000300181 HIRIP3Q9BW71 556 aaPredicted RBP23.69■■□□□ 1.38
TSC22D4-201ENST00000300181 ASXL2Q76L83 1435 aa23.69■■□□□ 1.38
TSC22D4-201ENST00000300181 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
TSC22D4-201ENST00000300181 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
TSC22D4-201ENST00000300181 KIAA1107Q9UPP5 1409 aa23.67■■□□□ 1.38
TSC22D4-201ENST00000300181 NUP155O75694 1391 aa23.67■■□□□ 1.38
TSC22D4-201ENST00000300181 PKD2Q13563 968 aa23.65■■□□□ 1.38
TSC22D4-201ENST00000300181 ABCC1P33527 1531 aa23.65■■□□□ 1.38
TSC22D4-201ENST00000300181 MAST1Q9Y2H9 1570 aa23.64■■□□□ 1.38
TSC22D4-201ENST00000300181 NPM1P06748 294 aaKnown RBP eCLIP23.63■■□□□ 1.37
TSC22D4-201ENST00000300181 TRAPPC8Q9Y2L5 1435 aa23.62■■□□□ 1.37
TSC22D4-201ENST00000300181 ABCA9Q8IUA7 1624 aa23.62■■□□□ 1.37
TSC22D4-201ENST00000300181 L3MBTL2Q969R5 705 aa23.62■■□□□ 1.37
TSC22D4-201ENST00000300181 RPRD2Q5VT52 1461 aaKnown RBP23.61■■□□□ 1.37
TSC22D4-201ENST00000300181 PELP1Q8IZL8 1130 aaKnown RBP23.6■■□□□ 1.37
TSC22D4-201ENST00000300181 PLXNC1O60486 1568 aa23.58■■□□□ 1.37
TSC22D4-201ENST00000300181 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
TSC22D4-201ENST00000300181 FANCAO15360 1455 aa23.57■■□□□ 1.36
TSC22D4-201ENST00000300181 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
TSC22D4-201ENST00000300181 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
TSC22D4-201ENST00000300181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.36
TSC22D4-201ENST00000300181 TEX14Q8IWB6 1497 aa23.53■■□□□ 1.36
TSC22D4-201ENST00000300181 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
TSC22D4-201ENST00000300181 SPAG9O60271 1321 aaKnown RBP23.51■■□□□ 1.35
TSC22D4-201ENST00000300181 DUOX2Q9NRD8 1548 aa23.51■■□□□ 1.35
TSC22D4-201ENST00000300181 ADGRL1O94910 1474 aa23.49■■□□□ 1.35
TSC22D4-201ENST00000300181 UNC13BO14795 1591 aa23.49■■□□□ 1.35
TSC22D4-201ENST00000300181 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
TSC22D4-201ENST00000300181 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
TSC22D4-201ENST00000300181 NBPF8Q3BBV2 869 aa23.47■■□□□ 1.35
TSC22D4-201ENST00000300181 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
TSC22D4-201ENST00000300181 SCAPERQ9BY12 1400 aa23.46■■□□□ 1.35
TSC22D4-201ENST00000300181 MYT1LQ9UL68 1186 aa23.46■■□□□ 1.35
TSC22D4-201ENST00000300181 ERBINQ96RT1 1412 aa23.43■■□□□ 1.34
TSC22D4-201ENST00000300181 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
TSC22D4-201ENST00000300181 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
TSC22D4-201ENST00000300181 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
TSC22D4-201ENST00000300181 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
TSC22D4-201ENST00000300181 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
TSC22D4-201ENST00000300181 ATP7AQ04656 1500 aa23.41■■□□□ 1.34
TSC22D4-201ENST00000300181 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
TSC22D4-201ENST00000300181 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
TSC22D4-201ENST00000300181 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
TSC22D4-201ENST00000300181 INO80Q9ULG1 1556 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms