RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
CHMP4C-201ENST00000297265 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
CHMP4C-201ENST00000297265 KDM6BO15054 1643 aa19.94■□□□□ 0.78
CHMP4C-201ENST00000297265 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
CHMP4C-201ENST00000297265 ROCK1Q13464 1354 aa19.91■□□□□ 0.78
CHMP4C-201ENST00000297265 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
CHMP4C-201ENST00000297265 UHRF1BP1LA0JNW5 1464 aa19.89■□□□□ 0.77
CHMP4C-201ENST00000297265 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
CHMP4C-201ENST00000297265 ZNF777Q9ULD5 760 aaPredicted RBP19.85■□□□□ 0.77
CHMP4C-201ENST00000297265 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
CHMP4C-201ENST00000297265 CDC42BPBQ9Y5S2 1711 aa19.84■□□□□ 0.77
CHMP4C-201ENST00000297265 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
CHMP4C-201ENST00000297265 ZCCHC11Q5TAX3 1644 aaKnown RBP19.83■□□□□ 0.76
CHMP4C-201ENST00000297265 NCOA1Q15788 1441 aa19.82■□□□□ 0.76
CHMP4C-201ENST00000297265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHMP4C-201ENST00000297265 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
CHMP4C-201ENST00000297265 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
CHMP4C-201ENST00000297265 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
CHMP4C-201ENST00000297265 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
CHMP4C-201ENST00000297265 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
CHMP4C-201ENST00000297265 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
CHMP4C-201ENST00000297265 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
CHMP4C-201ENST00000297265 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
CHMP4C-201ENST00000297265 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
CHMP4C-201ENST00000297265 SAMD9LQ8IVG5 1584 aa19.77■□□□□ 0.76
CHMP4C-201ENST00000297265 ARHGEF5Q12774 1597 aa19.75■□□□□ 0.75
CHMP4C-201ENST00000297265 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHMP4C-201ENST00000297265 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
CHMP4C-201ENST00000297265 SHANK2Q9UPX8 1470 aa19.74■□□□□ 0.75
CHMP4C-201ENST00000297265 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
CHMP4C-201ENST00000297265 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
CHMP4C-201ENST00000297265 C9orf84Q5VXU9 1444 aa19.71■□□□□ 0.75
CHMP4C-201ENST00000297265 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
CHMP4C-201ENST00000297265 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
CHMP4C-201ENST00000297265 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
CHMP4C-201ENST00000297265 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
CHMP4C-201ENST00000297265 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
CHMP4C-201ENST00000297265 PLCH2O75038 1416 aa19.68■□□□□ 0.74
CHMP4C-201ENST00000297265 PZPP20742 1482 aa19.66■□□□□ 0.74
CHMP4C-201ENST00000297265 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CHMP4C-201ENST00000297265 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 FOXD1Q16676 465 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 ANKRD50Q9ULJ7 1429 aa19.65■□□□□ 0.74
CHMP4C-201ENST00000297265 ARHGEF12Q9NZN5 1544 aa19.64■□□□□ 0.73
CHMP4C-201ENST00000297265 KIAA1107Q9UPP5 1409 aa19.64■□□□□ 0.73
CHMP4C-201ENST00000297265 ANKRD30BQ9BXX2 1392 aa19.64■□□□□ 0.73
CHMP4C-201ENST00000297265 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
CHMP4C-201ENST00000297265 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
CHMP4C-201ENST00000297265 MAST1Q9Y2H9 1570 aa19.6■□□□□ 0.73
CHMP4C-201ENST00000297265 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
CHMP4C-201ENST00000297265 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
CHMP4C-201ENST00000297265 PLEKHH2Q8IVE3 1493 aa19.59■□□□□ 0.73
CHMP4C-201ENST00000297265 ARAP3Q8WWN8 1544 aa19.57■□□□□ 0.72
CHMP4C-201ENST00000297265 EFCAB2Q5VUJ9 269 aa19.56■□□□□ 0.72
CHMP4C-201ENST00000297265 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
CHMP4C-201ENST00000297265 ABCC1P33527 1531 aa19.55■□□□□ 0.72
CHMP4C-201ENST00000297265 ABCA9Q8IUA7 1624 aa19.55■□□□□ 0.72
CHMP4C-201ENST00000297265 KDM5DQ9BY66 1539 aa19.54■□□□□ 0.72
CHMP4C-201ENST00000297265 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
CHMP4C-201ENST00000297265 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
CHMP4C-201ENST00000297265 MIER1Q8N108 512 aa19.52■□□□□ 0.71
CHMP4C-201ENST00000297265 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
CHMP4C-201ENST00000297265 NUP155O75694 1391 aa19.51■□□□□ 0.71
CHMP4C-201ENST00000297265 PKD2Q13563 968 aa19.5■□□□□ 0.71
CHMP4C-201ENST00000297265 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
CHMP4C-201ENST00000297265 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
CHMP4C-201ENST00000297265 FANCAO15360 1455 aa19.46■□□□□ 0.71
CHMP4C-201ENST00000297265 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
CHMP4C-201ENST00000297265 UNC13BO14795 1591 aa19.43■□□□□ 0.7
CHMP4C-201ENST00000297265 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
CHMP4C-201ENST00000297265 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
CHMP4C-201ENST00000297265 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
CHMP4C-201ENST00000297265 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
CHMP4C-201ENST00000297265 RTEL1-TNFRSF6BF6WH68 1400 aa19.41■□□□□ 0.7
CHMP4C-201ENST00000297265 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.7
CHMP4C-201ENST00000297265 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.69
CHMP4C-201ENST00000297265 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
CHMP4C-201ENST00000297265 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
CHMP4C-201ENST00000297265 SPAG9O60271 1321 aaKnown RBP19.38■□□□□ 0.69
CHMP4C-201ENST00000297265 SCAPERQ9BY12 1400 aa19.37■□□□□ 0.69
CHMP4C-201ENST00000297265 ADGRL1O94910 1474 aa19.36■□□□□ 0.69
CHMP4C-201ENST00000297265 IQGAP3Q86VI3 1631 aa19.36■□□□□ 0.69
CHMP4C-201ENST00000297265 INO80Q9ULG1 1556 aaPredicted RBP19.35■□□□□ 0.69
CHMP4C-201ENST00000297265 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
CHMP4C-201ENST00000297265 CD109Q6YHK3 1445 aa19.33■□□□□ 0.68
CHMP4C-201ENST00000297265 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
CHMP4C-201ENST00000297265 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
CHMP4C-201ENST00000297265 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
CHMP4C-201ENST00000297265 PLA2R1Q13018 1463 aa19.32■□□□□ 0.68
CHMP4C-201ENST00000297265 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
CHMP4C-201ENST00000297265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHMP4C-201ENST00000297265 CYB5RLQ6IPT4 315 aa19.31■□□□□ 0.68
CHMP4C-201ENST00000297265 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
CHMP4C-201ENST00000297265 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
CHMP4C-201ENST00000297265 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.68
CHMP4C-201ENST00000297265 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
CHMP4C-201ENST00000297265 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms