RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 UACAQ9BZF9 1416 aa26.51■■□□□ 1.83
GABRB1-201ENST00000295454 AKNAQ7Z591 1439 aa26.5■■□□□ 1.83
GABRB1-201ENST00000295454 PLEKHD1A6NEE1 506 aa26.49■■□□□ 1.83
GABRB1-201ENST00000295454 CFDP1Q9UEE9 299 aaPredicted RBP26.46■■□□□ 1.83
GABRB1-201ENST00000295454 NEUROD1Q13562 356 aa26.44■■□□□ 1.82
GABRB1-201ENST00000295454 ABCC2Q92887 1545 aa26.44■■□□□ 1.82
GABRB1-201ENST00000295454 CROCC2H7BZ55 1655 aa26.44■■□□□ 1.82
GABRB1-201ENST00000295454 ZNF777Q9ULD5 760 aaPredicted RBP26.42■■□□□ 1.82
GABRB1-201ENST00000295454 ADGBQ8N7X0 1667 aa26.39■■□□□ 1.82
GABRB1-201ENST00000295454 DENND4BO75064 1496 aaPredicted RBP26.39■■□□□ 1.81
GABRB1-201ENST00000295454 ROCK1Q13464 1354 aa26.38■■□□□ 1.81
GABRB1-201ENST00000295454 CDC42BPBQ9Y5S2 1711 aa26.36■■□□□ 1.81
GABRB1-201ENST00000295454 TTC37Q6PGP7 1564 aa26.34■■□□□ 1.81
GABRB1-201ENST00000295454 ZCCHC11Q5TAX3 1644 aaKnown RBP26.34■■□□□ 1.81
GABRB1-201ENST00000295454 PREX2Q70Z35 1606 aa26.33■■□□□ 1.81
GABRB1-201ENST00000295454 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
GABRB1-201ENST00000295454 SAMD9LQ8IVG5 1584 aa26.29■■□□□ 1.8
GABRB1-201ENST00000295454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.28■■□□□ 1.8
GABRB1-201ENST00000295454 ADGRL2O95490 1459 aa26.27■■□□□ 1.8
GABRB1-201ENST00000295454 NCOA1Q15788 1441 aa26.26■■□□□ 1.79
GABRB1-201ENST00000295454 UHRF1BP1LA0JNW5 1464 aa26.26■■□□□ 1.79
GABRB1-201ENST00000295454 KDM5BQ9UGL1 1544 aa26.23■■□□□ 1.79
GABRB1-201ENST00000295454 MYO5CQ9NQX4 1742 aa26.22■■□□□ 1.79
GABRB1-201ENST00000295454 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
GABRB1-201ENST00000295454 ARHGEF5Q12774 1597 aa26.2■■□□□ 1.78
GABRB1-201ENST00000295454 SHANK2Q9UPX8 1470 aa26.2■■□□□ 1.78
GABRB1-201ENST00000295454 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
GABRB1-201ENST00000295454 MBD5Q9P267 1494 aa26.19■■□□□ 1.78
GABRB1-201ENST00000295454 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
GABRB1-201ENST00000295454 FOXD1Q16676 465 aa26.18■■□□□ 1.78
GABRB1-201ENST00000295454 TIMELESSQ9UNS1 1208 aa26.18■■□□□ 1.78
GABRB1-201ENST00000295454 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
GABRB1-201ENST00000295454 ARHGAP5Q13017 1502 aa26.17■■□□□ 1.78
GABRB1-201ENST00000295454 PPP1R15AO75807 674 aaPredicted RBP26.17■■□□□ 1.78
GABRB1-201ENST00000295454 KCNH8Q96L42 1107 aa26.16■■□□□ 1.78
GABRB1-201ENST00000295454 ANKRD30AQ9BXX3 1397 aa26.15■■□□□ 1.78
GABRB1-201ENST00000295454 SYCP2Q9BX26 1530 aa26.15■■□□□ 1.78
GABRB1-201ENST00000295454 PZPP20742 1482 aa26.13■■□□□ 1.77
GABRB1-201ENST00000295454 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
GABRB1-201ENST00000295454 MIER1Q8N108 512 aa26.11■■□□□ 1.77
GABRB1-201ENST00000295454 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
GABRB1-201ENST00000295454 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
GABRB1-201ENST00000295454 ANKRD30BQ9BXX2 1392 aa26.05■■□□□ 1.76
GABRB1-201ENST00000295454 TSPY4P0CV99 314 aa26.05■■□□□ 1.76
GABRB1-201ENST00000295454 TSPY10P0CW01 314 aa26.05■■□□□ 1.76
GABRB1-201ENST00000295454 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
GABRB1-201ENST00000295454 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
GABRB1-201ENST00000295454 KIF15Q9NS87 1388 aa26.03■■□□□ 1.76
GABRB1-201ENST00000295454 PLCH2O75038 1416 aa26.02■■□□□ 1.76
GABRB1-201ENST00000295454 MAST1Q9Y2H9 1570 aa26.01■■□□□ 1.75
GABRB1-201ENST00000295454 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
GABRB1-201ENST00000295454 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
GABRB1-201ENST00000295454 HIRIP3Q9BW71 556 aaPredicted RBP25.97■■□□□ 1.75
GABRB1-201ENST00000295454 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
GABRB1-201ENST00000295454 ABCC1P33527 1531 aa25.96■■□□□ 1.75
GABRB1-201ENST00000295454 KIAA1107Q9UPP5 1409 aa25.96■■□□□ 1.75
GABRB1-201ENST00000295454 PLEKHH2Q8IVE3 1493 aa25.95■■□□□ 1.75
GABRB1-201ENST00000295454 KDM5DQ9BY66 1539 aa25.94■■□□□ 1.74
GABRB1-201ENST00000295454 TEX14Q8IWB6 1497 aa25.93■■□□□ 1.74
GABRB1-201ENST00000295454 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
GABRB1-201ENST00000295454 RSPH4AQ5TD94 716 aa25.92■■□□□ 1.74
GABRB1-201ENST00000295454 NUP155O75694 1391 aa25.92■■□□□ 1.74
GABRB1-201ENST00000295454 L3MBTL2Q969R5 705 aa25.91■■□□□ 1.74
GABRB1-201ENST00000295454 PKD2Q13563 968 aa25.9■■□□□ 1.74
GABRB1-201ENST00000295454 ABCA9Q8IUA7 1624 aa25.9■■□□□ 1.74
GABRB1-201ENST00000295454 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
GABRB1-201ENST00000295454 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
GABRB1-201ENST00000295454 TRAPPC8Q9Y2L5 1435 aa25.88■■□□□ 1.73
GABRB1-201ENST00000295454 ARAP3Q8WWN8 1544 aa25.87■■□□□ 1.73
GABRB1-201ENST00000295454 UNC13BO14795 1591 aa25.84■■□□□ 1.73
GABRB1-201ENST00000295454 FAM135AQ9P2D6 1515 aa25.82■■□□□ 1.72
GABRB1-201ENST00000295454 YTHDC1Q96MU7 727 aaKnown RBP25.79■■□□□ 1.72
GABRB1-201ENST00000295454 FANCAO15360 1455 aa25.79■■□□□ 1.72
GABRB1-201ENST00000295454 DUOX2Q9NRD8 1548 aa25.78■■□□□ 1.72
GABRB1-201ENST00000295454 NBPF8Q3BBV2 869 aa25.78■■□□□ 1.72
GABRB1-201ENST00000295454 DDX10Q13206 875 aaKnown RBP25.77■■□□□ 1.72
GABRB1-201ENST00000295454 ZFYVE16Q7Z3T8 1539 aa25.76■■□□□ 1.71
GABRB1-201ENST00000295454 AFAP1Q8N556 730 aa25.75■■□□□ 1.71
GABRB1-201ENST00000295454 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
GABRB1-201ENST00000295454 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
GABRB1-201ENST00000295454 HSPA5P11021 654 aaKnown RBP25.7■■□□□ 1.71
GABRB1-201ENST00000295454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.7■■□□□ 1.71
GABRB1-201ENST00000295454 INO80Q9ULG1 1556 aaPredicted RBP25.7■■□□□ 1.7
GABRB1-201ENST00000295454 MAGI2Q86UL8 1455 aa25.7■■□□□ 1.7
GABRB1-201ENST00000295454 ADGRL1O94910 1474 aa25.69■■□□□ 1.7
GABRB1-201ENST00000295454 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
GABRB1-201ENST00000295454 NPM1P06748 294 aaKnown RBP eCLIP25.69■■□□□ 1.7
GABRB1-201ENST00000295454 ATP7AQ04656 1500 aa25.66■■□□□ 1.7
GABRB1-201ENST00000295454 SCAPERQ9BY12 1400 aa25.66■■□□□ 1.7
GABRB1-201ENST00000295454 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
GABRB1-201ENST00000295454 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
GABRB1-201ENST00000295454 PLA2R1Q13018 1463 aa25.62■■□□□ 1.69
GABRB1-201ENST00000295454 EIF4G2P78344 907 aaKnown RBP eCLIP25.6■■□□□ 1.69
GABRB1-201ENST00000295454 SCAF1Q9H7N4 1312 aaKnown RBP25.59■■□□□ 1.69
GABRB1-201ENST00000295454 ZNF326Q5BKZ1 582 aaKnown RBP25.58■■□□□ 1.69
GABRB1-201ENST00000295454 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.68
GABRB1-201ENST00000295454 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.68
GABRB1-201ENST00000295454 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.68
GABRB1-201ENST00000295454 KIDINS220Q9ULH0 1771 aa25.57■■□□□ 1.68
GABRB1-201ENST00000295454 DEPDC5O75140 1603 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms