RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
RAB3GAP1-201ENST00000264158 PPP1R1BQ9UD71 204 aaPredicted RBP12.27□□□□□ -0.45
RAB3GAP1-201ENST00000264158 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
RAB3GAP1-201ENST00000264158 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
RAB3GAP1-201ENST00000264158 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
RAB3GAP1-201ENST00000264158 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
RAB3GAP1-201ENST00000264158 GTF2E1P29083 439 aaPredicted RBP12.24□□□□□ -0.45
RAB3GAP1-201ENST00000264158 RAB3GAP2Q9H2M9 1393 aa12.24□□□□□ -0.45
RAB3GAP1-201ENST00000264158 RUSC2Q8N2Y8 1516 aa12.24□□□□□ -0.45
RAB3GAP1-201ENST00000264158 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
RAB3GAP1-201ENST00000264158 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
RAB3GAP1-201ENST00000264158 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■■□ 20.9
RAB3GAP1-201ENST00000264158 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
RAB3GAP1-201ENST00000264158 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
RAB3GAP1-201ENST00000264158 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
RAB3GAP1-201ENST00000264158 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.46
RAB3GAP1-201ENST00000264158 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.46
RAB3GAP1-201ENST00000264158 NUDCQ9Y266 331 aa12.21□□□□□ -0.46
RAB3GAP1-201ENST00000264158 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
RAB3GAP1-201ENST00000264158 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
RAB3GAP1-201ENST00000264158 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
RAB3GAP1-201ENST00000264158 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
RAB3GAP1-201ENST00000264158 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
RAB3GAP1-201ENST00000264158 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
RAB3GAP1-201ENST00000264158 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
RAB3GAP1-201ENST00000264158 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
RAB3GAP1-201ENST00000264158 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
RAB3GAP1-201ENST00000264158 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
RAB3GAP1-201ENST00000264158 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
RAB3GAP1-201ENST00000264158 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
RAB3GAP1-201ENST00000264158 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
RAB3GAP1-201ENST00000264158 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
RAB3GAP1-201ENST00000264158 PSME1Q06323 249 aa12.15□□□□□ -0.46
RAB3GAP1-201ENST00000264158 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
RAB3GAP1-201ENST00000264158 MYH16Q9H6N6 1097 aa12.15□□□□□ -0.46
RAB3GAP1-201ENST00000264158 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
RAB3GAP1-201ENST00000264158 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
RAB3GAP1-201ENST00000264158 LTV1Q96GA3 475 aaPredicted RBP12.14□□□□□ -0.47
RAB3GAP1-201ENST00000264158 CC2D2AQ9P2K1 1620 aa12.14□□□□□ -0.47
RAB3GAP1-201ENST00000264158 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
RAB3GAP1-201ENST00000264158 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
RAB3GAP1-201ENST00000264158 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
RAB3GAP1-201ENST00000264158 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
RAB3GAP1-201ENST00000264158 UBAP1LF5GYI3 381 aa12.13□□□□□ -0.47
RAB3GAP1-201ENST00000264158 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
RAB3GAP1-201ENST00000264158 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
RAB3GAP1-201ENST00000264158 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
RAB3GAP1-201ENST00000264158 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
RAB3GAP1-201ENST00000264158 AMPHP49418 695 aa12.11□□□□□ -0.47
RAB3GAP1-201ENST00000264158 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
RAB3GAP1-201ENST00000264158 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
RAB3GAP1-201ENST00000264158 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.47
RAB3GAP1-201ENST00000264158 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
RAB3GAP1-201ENST00000264158 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.483e-7■■■■■ 39.6
RAB3GAP1-201ENST00000264158 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
RAB3GAP1-201ENST00000264158 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
RAB3GAP1-201ENST00000264158 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
RAB3GAP1-201ENST00000264158 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
RAB3GAP1-201ENST00000264158 ERICH6BQ5W0A0 696 aa12.06□□□□□ -0.48
RAB3GAP1-201ENST00000264158 TOM1O60784 492 aa12.05□□□□□ -0.48
RAB3GAP1-201ENST00000264158 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
RAB3GAP1-201ENST00000264158 PKD2Q13563 968 aa12.04□□□□□ -0.48
RAB3GAP1-201ENST00000264158 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
RAB3GAP1-201ENST00000264158 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
RAB3GAP1-201ENST00000264158 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
RAB3GAP1-201ENST00000264158 RGS3P49796 1198 aa12.03□□□□□ -0.48
RAB3GAP1-201ENST00000264158 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
RAB3GAP1-201ENST00000264158 MPHOSPH9Q99550 1183 aa12.03□□□□□ -0.48
RAB3GAP1-201ENST00000264158 NUP155O75694 1391 aa12.02□□□□□ -0.48
RAB3GAP1-201ENST00000264158 HMGXB3Q12766 1538 aa12.02□□□□□ -0.48
RAB3GAP1-201ENST00000264158 BECN1Q14457 450 aa12.02□□□□□ -0.48
RAB3GAP1-201ENST00000264158 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
RAB3GAP1-201ENST00000264158 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
RAB3GAP1-201ENST00000264158 TMF1P82094 1093 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 MORC1Q86VD1 984 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 NGLY1Q96IV0 654 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 STRN4Q9NRL3 753 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
RAB3GAP1-201ENST00000264158 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
RAB3GAP1-201ENST00000264158 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
RAB3GAP1-201ENST00000264158 PRG4Q92954 1404 aaPredicted RBP11.99□□□□□ -0.49
RAB3GAP1-201ENST00000264158 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
RAB3GAP1-201ENST00000264158 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
RAB3GAP1-201ENST00000264158 ESCO1Q5FWF5 840 aa11.98□□□□□ -0.49
RAB3GAP1-201ENST00000264158 NESP48681 1621 aa11.98□□□□□ -0.49
RAB3GAP1-201ENST00000264158 TAF7LQ5H9L4 462 aa11.98□□□□□ -0.49
RAB3GAP1-201ENST00000264158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAB3GAP1-201ENST00000264158 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
RAB3GAP1-201ENST00000264158 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.5
RAB3GAP1-201ENST00000264158 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.5
RAB3GAP1-201ENST00000264158 CFTRP13569 1480 aa11.96□□□□□ -0.5
RAB3GAP1-201ENST00000264158 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
RAB3GAP1-201ENST00000264158 NLRP2Q9NX02 1062 aa11.95□□□□□ -0.5
RAB3GAP1-201ENST00000264158 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
RAB3GAP1-201ENST00000264158 KIF21BO75037 1637 aa11.95□□□□□ -0.5
RAB3GAP1-201ENST00000264158 ADAMTS2O95450 1211 aa11.94□□□□□ -0.5
RAB3GAP1-201ENST00000264158 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms