RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 Cabp1Q9JLK7 227 aa21.78■■□□□ 1.08
Chrna3-202ENSMUST00000214204 Znf608Q56A10 1511 aa21.78■■□□□ 1.08
Chrna3-202ENSMUST00000214204 Tdrd9Q14BI7 1383 aa21.76■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Fam208aQ69ZR9 1610 aaKnown RBP21.76■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Mia2Q91ZV0 1396 aa21.75■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Fhad1A6PWD2 1420 aa21.75■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Cep170Q6A065 1588 aa21.74■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Plekhh2Q8C115 1491 aa21.72■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Vps8Q0P5W1 1427 aa21.71■■□□□ 1.07
Chrna3-202ENSMUST00000214204 Atp10dQ8K2X1 1416 aa21.7■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Dennd4bQ3U1Y4 1499 aa21.7■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Mtus2Q3UHD3 1353 aa21.69■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Ube2uB1AUC4 352 aa21.68■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Mlh3A0A1Y7VMP7 1443 aa21.68■■□□□ 1.06
Chrna3-202ENSMUST00000214204 UacaQ8CGB3 1411 aa21.67■■□□□ 1.06
Chrna3-202ENSMUST00000214204 SphkapQ6NSW3 1687 aa21.67■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Arid3cA6PWV5 409 aa21.66■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Kiaa1210E9Q0C6 1637 aa21.65■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Arhgap5P97393 1501 aa21.65■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Igf1rQ60751 1373 aa21.65■■□□□ 1.06
Chrna3-202ENSMUST00000214204 Abca8bQ8K440 1620 aa21.64■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Lrrc9Q8CDN9 1456 aa21.64■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Adgrb2Q8CGM1 1561 aa21.62■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Caskin1Q6P9K8 1431 aa21.62■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Gm156Q58A37 223 aa21.62■■□□□ 1.05
Chrna3-202ENSMUST00000214204 AI481877A2ALV5 1481 aa21.62■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Wdr7Q920I9 1489 aa21.62■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Rnf17Q99MV7 1640 aa21.61■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Trappc8E9PWG2 1437 aa21.6■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Zfp644E9QA22 1323 aa21.59■■□□□ 1.05
Chrna3-202ENSMUST00000214204 Cdk11bP24788 784 aaKnown RBP21.58■■□□□ 1.04
Chrna3-202ENSMUST00000214204 TonslQ6NZL6 1363 aa21.57■■□□□ 1.04
Chrna3-202ENSMUST00000214204 Kdm3bQ6ZPY7 1562 aa21.57■■□□□ 1.04
Chrna3-202ENSMUST00000214204 Rfx7F8VPJ6 1459 aa21.57■■□□□ 1.04
Chrna3-202ENSMUST00000214204 Gm32742A0A1B0GT42 1604 aa21.56■■□□□ 1.04
Chrna3-202ENSMUST00000214204 Il16O54824 1322 aa21.55■■□□□ 1.04
Chrna3-202ENSMUST00000214204 NclP09405 707 aaKnown RBP21.55■■□□□ 1.04
Chrna3-202ENSMUST00000214204 Pdcd11Q6NS46 1862 aaKnown RBP21.51■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Ccer2J3QPU5 274 aa21.5■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Sart1Q9Z315 806 aaKnown RBP21.5■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Adgrl3Q80TS3 1537 aa21.49■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Ak9G3UYQ4 1894 aa21.49■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Las1lA2BE28 776 aaKnown RBP21.46■■□□□ 1.03
Chrna3-202ENSMUST00000214204 Zfyve16Q80U44 1528 aa21.45■■□□□ 1.02
Chrna3-202ENSMUST00000214204 AlkP97793 1621 aa21.45■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Mphosph9A6H5Y1 991 aa21.44■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Kidins220E9Q9B7 1793 aa21.44■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Cdc42bpbQ7TT50 1713 aa21.44■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Hspa5P20029 655 aaKnown RBP21.44■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Rrp7aQ9D1C9 280 aaKnown RBP21.44■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Cfap74Q3UY96 1578 aa21.43■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Col17a1Q07563 1470 aa21.43■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Fmn2Q9JL04 1578 aa21.42■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Abcc3B2RX12 1523 aa21.42■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Zbtb7cQ8VCZ7 619 aa21.41■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Fhod3Q76LL6 1578 aa21.41■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Ankrd36D3Z4K0 1415 aa21.41■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Setbp1Q9Z180 1582 aa21.41■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Abca9Q8K449 1623 aa21.4■■□□□ 1.02
Chrna3-202ENSMUST00000214204 Pprc1Q6NZN1 1644 aa21.35■■□□□ 1.01
Chrna3-202ENSMUST00000214204 Aebp2Q9Z248 504 aaKnown RBP21.35■■□□□ 1.01
Chrna3-202ENSMUST00000214204 Map3k5O35099 1380 aa21.35■■□□□ 1.01
Chrna3-202ENSMUST00000214204 Supt6hQ62383 1726 aaKnown RBP21.34■■□□□ 1.01
Chrna3-202ENSMUST00000214204 Ssh2Q5SW75 1423 aa21.33■■□□□ 1.01
Chrna3-202ENSMUST00000214204 Mast1Q9R1L5 1570 aa21.32■■□□□ 1
Chrna3-202ENSMUST00000214204 Hecw1Q8K4P8 1604 aa21.32■■□□□ 1
Chrna3-202ENSMUST00000214204 Ppargc1bQ8VHJ7 1014 aa21.32■■□□□ 1
Chrna3-202ENSMUST00000214204 Ttll5Q8CHB8 1328 aa21.32■■□□□ 1
Chrna3-202ENSMUST00000214204 Adgrl2Q8JZZ7 1487 aa21.32■■□□□ 1
Chrna3-202ENSMUST00000214204 Supt5hO55201 1082 aaKnown RBP21.31■■□□□ 1
Chrna3-202ENSMUST00000214204 Nup155Q99P88 1391 aaKnown RBP21.3■■□□□ 1
Chrna3-202ENSMUST00000214204 Pkd2O35245 966 aa21.29■■□□□ 1
Chrna3-202ENSMUST00000214204 Depdc5P61460 1591 aa21.29■■□□□ 1
Chrna3-202ENSMUST00000214204 Trpm2Q91YD4 1506 aa21.27■■□□□ 1
Chrna3-202ENSMUST00000214204 Ppp1r18Q8BQ30 594 aa21.27■■□□□ 1
Chrna3-202ENSMUST00000214204 Map4P27546 1125 aaKnown RBP21.26■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Trak1Q6PD31 939 aa21.26■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Lemd3Q9WU40 921 aa21.26■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Lamc1P02468 1607 aaKnown RBP21.25■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Ttbk1Q6PCN3 1308 aa21.25■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Kif21bQ9QXL1 1668 aa21.25■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Wdr66E9Q743 1299 aa21.25■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Neurl4Q5NCX5 1563 aa21.23■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Dhx9O70133 1380 aaKnown RBP21.22■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Asxl1P59598 1514 aa21.21■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Spag9Q58A65 1321 aaKnown RBP21.21■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Prdm16A2A935 1275 aa21.2■□□□□ 0.99
Chrna3-202ENSMUST00000214204 Xrn1P97789 1719 aaKnown RBP21.2■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Pcgf6Q99NA9 353 aa21.19■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Clasp1Q80TV8 1535 aaKnown RBP21.18■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Hnrnpul2Q00PI9 745 aaKnown RBP21.18■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Usp47Q8BY87 1376 aa21.16■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Sall2Q9QX96 1004 aa21.16■□□□□ 0.98
Chrna3-202ENSMUST00000214204 OvosQ3UU35 1456 aa21.15■□□□□ 0.98
Chrna3-202ENSMUST00000214204 Naip5Q9R016 1403 aa21.14■□□□□ 0.97
Chrna3-202ENSMUST00000214204 Abca17E9PX95 1733 aa21.14■□□□□ 0.97
Chrna3-202ENSMUST00000214204 Usp54Q8BL06 1588 aaKnown RBP21.14■□□□□ 0.97
Chrna3-202ENSMUST00000214204 Ptch1Q61115 1434 aa21.13■□□□□ 0.97
Chrna3-202ENSMUST00000214204 Ttc37F8VPK0 1563 aa21.12■□□□□ 0.97
Chrna3-202ENSMUST00000214204 AglF8VPN4 1532 aa21.12■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms