RNA–Protein interactions for RNA: ENSMUST00000111191.8

Cd44-205, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-205ENSMUST00000111191 Fam208aQ69ZR9 1610 aaKnown RBP11.56□□□□□ -0.56
Cd44-205ENSMUST00000111191 Ccnb3Q810T2 1396 aa11.55□□□□□ -0.56
Cd44-205ENSMUST00000111191 Abca8bQ8K440 1620 aa11.55□□□□□ -0.56
Cd44-205ENSMUST00000111191 3425401B19RikD3Z1D3 1412 aa11.54□□□□□ -0.56
Cd44-205ENSMUST00000111191 Ifnlr1Q8CGK5 535 aa11.52□□□□□ -0.57
Cd44-205ENSMUST00000111191 Clasp1Q80TV8 1535 aaKnown RBP11.51□□□□□ -0.57
Cd44-205ENSMUST00000111191 Arid3cA6PWV5 409 aa11.5□□□□□ -0.57
Cd44-205ENSMUST00000111191 Arhgef40Q3UPH7 1517 aa11.5□□□□□ -0.57
Cd44-205ENSMUST00000111191 Zfyve16Q80U44 1528 aa11.5□□□□□ -0.57
Cd44-205ENSMUST00000111191 Mlh3A0A1Y7VMP7 1443 aa11.48□□□□□ -0.57
Cd44-205ENSMUST00000111191 Ak9G3UYQ4 1894 aa11.48□□□□□ -0.57
Cd44-205ENSMUST00000111191 UbtfP25976 765 aaKnown RBP11.47□□□□□ -0.57
Cd44-205ENSMUST00000111191 Adcy10Q8C0T9 1614 aa11.47□□□□□ -0.57
Cd44-205ENSMUST00000111191 A2mQ6GQT1 1474 aa11.46□□□□□ -0.57
Cd44-205ENSMUST00000111191 Rnf17Q99MV7 1640 aa11.44□□□□□ -0.58
Cd44-205ENSMUST00000111191 Caskin1Q6P9K8 1431 aa11.44□□□□□ -0.58
Cd44-205ENSMUST00000111191 Ncapd3Q6ZQK0 1506 aa11.44□□□□□ -0.58
Cd44-205ENSMUST00000111191 Tdrd9Q14BI7 1383 aa11.44□□□□□ -0.58
Cd44-205ENSMUST00000111191 Kdm6bQ5NCY0 1641 aa11.43□□□□□ -0.58
Cd44-205ENSMUST00000111191 Ttc37F8VPK0 1563 aa11.42□□□□□ -0.58
Cd44-205ENSMUST00000111191 Depdc5P61460 1591 aa11.42□□□□□ -0.58
Cd44-205ENSMUST00000111191 Ttbk1Q6PCN3 1308 aa11.42□□□□□ -0.58
Cd44-205ENSMUST00000111191 Trappc8E9PWG2 1437 aa11.42□□□□□ -0.58
Cd44-205ENSMUST00000111191 AglF8VPN4 1532 aa11.41□□□□□ -0.58
Cd44-205ENSMUST00000111191 Gm32742A0A1B0GT42 1604 aa11.41□□□□□ -0.58
Cd44-205ENSMUST00000111191 Abca9Q8K449 1623 aa11.41□□□□□ -0.58
Cd44-205ENSMUST00000111191 Abcc5Q9R1X5 1436 aa11.41□□□□□ -0.58
Cd44-205ENSMUST00000111191 Abcc3B2RX12 1523 aa11.41□□□□□ -0.58
Cd44-205ENSMUST00000111191 Ppp1r18Q8BQ30 594 aa11.4□□□□□ -0.58
Cd44-205ENSMUST00000111191 Arhgap5P97393 1501 aa11.39□□□□□ -0.59
Cd44-205ENSMUST00000111191 Pcdh10E9PXQ7 1057 aa11.38□□□□□ -0.59
Cd44-205ENSMUST00000111191 Naip2Q9QUK4 1447 aa11.38□□□□□ -0.59
Cd44-205ENSMUST00000111191 Pdcd11Q6NS46 1862 aaKnown RBP11.36□□□□□ -0.59
Cd44-205ENSMUST00000111191 Cfap74Q3UY96 1578 aa11.36□□□□□ -0.59
Cd44-205ENSMUST00000111191 Kidins220E9Q9B7 1793 aa11.35□□□□□ -0.59
Cd44-205ENSMUST00000111191 Cdk11bP24788 784 aaKnown RBP11.35□□□□□ -0.59
Cd44-205ENSMUST00000111191 Cabp1Q9JLK7 227 aa11.35□□□□□ -0.59
Cd44-205ENSMUST00000111191 Il16O54824 1322 aa11.34□□□□□ -0.59
Cd44-205ENSMUST00000111191 Plekhh2Q8C115 1491 aa11.32□□□□□ -0.6
Cd44-205ENSMUST00000111191 Sart1Q9Z315 806 aaKnown RBP11.32□□□□□ -0.6
Cd44-205ENSMUST00000111191 Dennd4bQ3U1Y4 1499 aa11.32□□□□□ -0.6
Cd44-205ENSMUST00000111191 Mtus2Q3UHD3 1353 aa11.31□□□□□ -0.6
Cd44-205ENSMUST00000111191 Mier1Q5UAK0 511 aa11.3□□□□□ -0.6
Cd44-205ENSMUST00000111191 Chic2Q9D9G3 165 aa11.3□□□□□ -0.6
Cd44-205ENSMUST00000111191 Kiaa0556Q8C753 1610 aa11.3□□□□□ -0.6
Cd44-205ENSMUST00000111191 AdgbG3UZ78 1657 aa11.3□□□□□ -0.6
Cd44-205ENSMUST00000111191 Neurl4Q5NCX5 1563 aa11.3□□□□□ -0.6
Cd44-205ENSMUST00000111191 SphkapQ6NSW3 1687 aa11.29□□□□□ -0.6
Cd44-205ENSMUST00000111191 Kdm3bQ6ZPY7 1562 aa11.29□□□□□ -0.6
Cd44-205ENSMUST00000111191 Adgrb2Q8CGM1 1561 aa11.29□□□□□ -0.6
Cd44-205ENSMUST00000111191 Fndc1E9Q043 1732 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Kdm5cP41230 1554 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Mast1Q9R1L5 1570 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Rfx7F8VPJ6 1459 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 UacaQ8CGB3 1411 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Lemd3Q9WU40 921 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Cdc42bpbQ7TT50 1713 aa11.28□□□□□ -0.6
Cd44-205ENSMUST00000111191 Dnajc5gQ8C632 165 aa11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 Fam50aQ9WV03 339 aaKnown RBP11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 OvosQ3UU35 1456 aa11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 Fhad1A6PWD2 1420 aa11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 Hecw1Q8K4P8 1604 aa11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 Mia2Q91ZV0 1396 aa11.26□□□□□ -0.61
Cd44-205ENSMUST00000111191 Kcna4Q61423 654 aa11.25□□□□□ -0.61
Cd44-205ENSMUST00000111191 Adgrl2Q8JZZ7 1487 aa11.25□□□□□ -0.61
Cd44-205ENSMUST00000111191 Vps8Q0P5W1 1427 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Ptch1Q61115 1434 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Synj2Q9D2G5 1434 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Nos1Q9Z0J4 1429 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Fmn2Q9JL04 1578 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Atp10aO54827 1508 aa11.24□□□□□ -0.61
Cd44-205ENSMUST00000111191 Prdm16A2A935 1275 aa11.23□□□□□ -0.61
Cd44-205ENSMUST00000111191 Map3k5O35099 1380 aa11.23□□□□□ -0.61
Cd44-205ENSMUST00000111191 Dip2cE9PWR4 1557 aa11.21□□□□□ -0.61
Cd44-205ENSMUST00000111191 Yeats2Q3TUF7 1407 aa11.21□□□□□ -0.62
Cd44-205ENSMUST00000111191 Ssh2Q5SW75 1423 aa11.21□□□□□ -0.62
Cd44-205ENSMUST00000111191 Rrp7aQ9D1C9 280 aaKnown RBP11.2□□□□□ -0.62
Cd44-205ENSMUST00000111191 Hecw2Q6I6G8 1578 aa11.19□□□□□ -0.62
Cd44-205ENSMUST00000111191 AlkP97793 1621 aa11.19□□□□□ -0.62
Cd44-205ENSMUST00000111191 Zfp644E9QA22 1323 aa11.19□□□□□ -0.62
Cd44-205ENSMUST00000111191 RereQ80TZ9 1558 aa11.19□□□□□ -0.62
Cd44-205ENSMUST00000111191 Trpm2Q91YD4 1506 aa11.17□□□□□ -0.62
Cd44-205ENSMUST00000111191 Fhod3Q76LL6 1578 aa11.17□□□□□ -0.62
Cd44-205ENSMUST00000111191 Xrn1P97789 1719 aaKnown RBP11.17□□□□□ -0.62
Cd44-205ENSMUST00000111191 NclP09405 707 aaKnown RBP11.16□□□□□ -0.62
Cd44-205ENSMUST00000111191 Znf518aB2RRF6 1478 aaKnown RBP11.16□□□□□ -0.62
Cd44-205ENSMUST00000111191 Cdc42bpgQ80UW5 1551 aa11.14□□□□□ -0.63
Cd44-205ENSMUST00000111191 Naip6Q9JIB6 1403 aa11.14□□□□□ -0.63
Cd44-205ENSMUST00000111191 Zmym4A2A791 1549 aaKnown RBP11.14□□□□□ -0.63
Cd44-205ENSMUST00000111191 Spag9Q58A65 1321 aaKnown RBP11.13□□□□□ -0.63
Cd44-205ENSMUST00000111191 Topbp1Q6ZQF0 1515 aa11.13□□□□□ -0.63
Cd44-205ENSMUST00000111191 Acin1Q9JIX8 1338 aaKnown RBP11.13□□□□□ -0.63
Cd44-205ENSMUST00000111191 Abca17E9PX95 1733 aa11.12□□□□□ -0.63
Cd44-205ENSMUST00000111191 Robo2Q7TPD3 1470 aa11.12□□□□□ -0.63
Cd44-205ENSMUST00000111191 Usp54Q8BL06 1588 aaKnown RBP11.11□□□□□ -0.63
Cd44-205ENSMUST00000111191 Ttll5Q8CHB8 1328 aa11.1□□□□□ -0.63
Cd44-205ENSMUST00000111191 Nup155Q99P88 1391 aaKnown RBP11.1□□□□□ -0.63
Cd44-205ENSMUST00000111191 NpatQ8BMA5 1420 aa11.1□□□□□ -0.63
Cd44-205ENSMUST00000111191 Uggt2E9Q4X2 1504 aa11.1□□□□□ -0.63
Cd44-205ENSMUST00000111191 Asxl1P59598 1514 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 248.2 ms