RNA–Protein interactions for RNA: ENSMUST00000109111.1

Clk4-202, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 2 BASIC

Gene Clk4, Length 1,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-202ENSMUST00000109111 Rgl2Q61193 778 aa11.23□□□□□ -0.61
Clk4-202ENSMUST00000109111 Mier1Q5UAK0 511 aa11.22□□□□□ -0.61
Clk4-202ENSMUST00000109111 Stk25Q9Z2W1 426 aa11.21□□□□□ -0.61
Clk4-202ENSMUST00000109111 Krtap3-2Q9D638 99 aa11.19□□□□□ -0.62
Clk4-202ENSMUST00000109111 Krtap3-3Q9D7P0 99 aa11.19□□□□□ -0.62
Clk4-202ENSMUST00000109111 Cacna1iE9Q7P2 2199 aa11.16□□□□□ -0.62
Clk4-202ENSMUST00000109111 Erich4Q3UNU4 136 aa11.16□□□□□ -0.62
Clk4-202ENSMUST00000109111 Klra4Q60651 263 aa11.16□□□□□ -0.62
Clk4-202ENSMUST00000109111 Erbb3Q61526 1339 aa11.15□□□□□ -0.62
Clk4-202ENSMUST00000109111 GcgrQ61606 485 aa11.14□□□□□ -0.63
Clk4-202ENSMUST00000109111 UncxO08934 530 aa11.13□□□□□ -0.63
Clk4-202ENSMUST00000109111 Crim1Q9JLL0 1037 aa11.12□□□□□ -0.63
Clk4-202ENSMUST00000109111 AaasP58742 546 aa11.1□□□□□ -0.63
Clk4-202ENSMUST00000109111 Lrrc14bQ3UJB3 510 aa11.1□□□□□ -0.63
Clk4-202ENSMUST00000109111 Kctd12Q6WVG3 327 aa11.1□□□□□ -0.63
Clk4-202ENSMUST00000109111 Itgbl1Q8VDV0 494 aa11.08□□□□□ -0.64
Clk4-202ENSMUST00000109111 Sgip1Q8VD37 806 aa11.07□□□□□ -0.64
Clk4-202ENSMUST00000109111 Cdca7lQ922M5 438 aa11.05□□□□□ -0.64
Clk4-202ENSMUST00000109111 Inpp5dQ9ES52 1191 aa11.03□□□□□ -0.64
Clk4-202ENSMUST00000109111 Fbxo11Q7TPD1 930 aaKnown RBP11.02□□□□□ -0.64
Clk4-202ENSMUST00000109111 Slc24a1Q91WD8 1130 aa11.01□□□□□ -0.65
Clk4-202ENSMUST00000109111 Pcdhb20Q91XZ9 799 aa11□□□□□ -0.65
Clk4-202ENSMUST00000109111 Pdcd7Q9WTY1 482 aa11□□□□□ -0.65
Clk4-202ENSMUST00000109111 Skiv2lQ6NZR5 1244 aa10.99□□□□□ -0.65
Clk4-202ENSMUST00000109111 Itga6Q61739 1091 aa10.98□□□□□ -0.65
Clk4-202ENSMUST00000109111 A0A1Y7VLE6 161 aa10.97□□□□□ -0.65
Clk4-202ENSMUST00000109111 1700006A11RikB9EHI3 544 aa10.97□□□□□ -0.65
Clk4-202ENSMUST00000109111 JmyQ9QXM1 983 aa10.96□□□□□ -0.65
Clk4-202ENSMUST00000109111 Ms4a4cQ9D3F6 226 aa10.95□□□□□ -0.66
Clk4-202ENSMUST00000109111 Prdm10Q3UTQ7 1184 aa10.94□□□□□ -0.66
Clk4-202ENSMUST00000109111 Krtap28-13A0A087WQP5 138 aa10.92□□□□□ -0.66
Clk4-202ENSMUST00000109111 Krtap28-10A0A1Y7VP58 119 aa10.92□□□□□ -0.66
Clk4-202ENSMUST00000109111 Nfxl1E9Q8I7 918 aaKnown RBP10.92□□□□□ -0.66
Clk4-202ENSMUST00000109111 Gm35339A0A140LHH9 1649 aa10.91□□□□□ -0.66
Clk4-202ENSMUST00000109111 Spata31d1aE9QA35 1336 aa10.9□□□□□ -0.66
Clk4-202ENSMUST00000109111 Speer2E9Q9U2 264 aa10.9□□□□□ -0.66
Clk4-202ENSMUST00000109111 Fam221bQ8C627 487 aa10.89□□□□□ -0.67
Clk4-202ENSMUST00000109111 ZyxQ62523 564 aa10.87□□□□□ -0.67
Clk4-202ENSMUST00000109111 Eya1P97767 591 aa10.86□□□□□ -0.67
Clk4-202ENSMUST00000109111 Dnajc5gQ8C632 165 aa10.85□□□□□ -0.67
Clk4-202ENSMUST00000109111 Art1Q60935 325 aa10.84□□□□□ -0.67
Clk4-202ENSMUST00000109111 Pdia6Q922R8 440 aaKnown RBP10.84□□□□□ -0.67
Clk4-202ENSMUST00000109111 Noa1Q9JJG9 693 aaKnown RBP10.84□□□□□ -0.67
Clk4-202ENSMUST00000109111 Rem2Q8VEL9 341 aa10.84□□□□□ -0.67
Clk4-202ENSMUST00000109111 Masp1P98064 704 aa10.83□□□□□ -0.68
Clk4-202ENSMUST00000109111 Dnajc5P60904 198 aa10.82□□□□□ -0.68
Clk4-202ENSMUST00000109111 IncenpQ9WU62 880 aa10.81□□□□□ -0.68
Clk4-202ENSMUST00000109111 Pax4P32115 349 aa10.79□□□□□ -0.68
Clk4-202ENSMUST00000109111 Ffar3Q3UFD7 319 aa10.79□□□□□ -0.68
Clk4-202ENSMUST00000109111 NischQ80TM9 1593 aa10.79□□□□□ -0.68
Clk4-202ENSMUST00000109111 LipiF6YQT7 476 aa10.78□□□□□ -0.68
Clk4-202ENSMUST00000109111 Vars2Q3U2A8 1060 aa10.77□□□□□ -0.68
Clk4-202ENSMUST00000109111 A030005K14RikA0A1Y7VNY1 122 aa10.76□□□□□ -0.69
Clk4-202ENSMUST00000109111 Emp3O35912 163 aa10.76□□□□□ -0.69
Clk4-202ENSMUST00000109111 Suv39h2Q9EQQ0 477 aa10.76□□□□□ -0.69
Clk4-202ENSMUST00000109111 Slc12a5Q91V14 1138 aa10.75□□□□□ -0.69
Clk4-202ENSMUST00000109111 Sirt1Q923E4 737 aa10.75□□□□□ -0.69
Clk4-202ENSMUST00000109111 Mre11Q61216 706 aa10.75□□□□□ -0.69
Clk4-202ENSMUST00000109111 Mllt6B1AR10 1109 aa10.74□□□□□ -0.69
Clk4-202ENSMUST00000109111 Erbb4Q61527 1308 aa10.74□□□□□ -0.69
Clk4-202ENSMUST00000109111 Map4k4P97820 1233 aaKnown RBP10.73□□□□□ -0.69
Clk4-202ENSMUST00000109111 Lrfn2Q80TG9 788 aa10.73□□□□□ -0.69
Clk4-202ENSMUST00000109111 Prrt3Q6PE13 971 aa10.72□□□□□ -0.69
Clk4-202ENSMUST00000109111 FurinP23188 793 aa10.68□□□□□ -0.7
Clk4-202ENSMUST00000109111 P3h3Q8CG70 732 aa10.67□□□□□ -0.7
Clk4-202ENSMUST00000109111 Traf7Q922B6 594 aa10.67□□□□□ -0.7
Clk4-202ENSMUST00000109111 CatipB9EKE5 520 aa10.67□□□□□ -0.7
Clk4-202ENSMUST00000109111 MetrnQ8C1Q4 291 aa10.67□□□□□ -0.7
Clk4-202ENSMUST00000109111 Wfs1P56695 890 aa10.66□□□□□ -0.7
Clk4-202ENSMUST00000109111 Nudt12Q9DCN1 462 aa10.65□□□□□ -0.7
Clk4-202ENSMUST00000109111 Plekhg3Q4VAC9 1341 aa10.64□□□□□ -0.71
Clk4-202ENSMUST00000109111 OscarQ8VBT3 265 aa10.64□□□□□ -0.71
Clk4-202ENSMUST00000109111 Gm13695A2AK44 830 aa10.62□□□□□ -0.71
Clk4-202ENSMUST00000109111 Ints3Q7TPD0 1041 aaKnown RBP10.62□□□□□ -0.71
Clk4-202ENSMUST00000109111 Ttll13A4Q9F6 804 aa10.6□□□□□ -0.71
Clk4-202ENSMUST00000109111 Unc5aQ8K1S4 898 aa10.59□□□□□ -0.71
Clk4-202ENSMUST00000109111 Ddx11Q6AXC6 880 aa10.58□□□□□ -0.72
Clk4-202ENSMUST00000109111 Tmc3Q7TQ69 1130 aa10.58□□□□□ -0.72
Clk4-202ENSMUST00000109111 Farp1F8VPU2 1048 aa10.57□□□□□ -0.72
Clk4-202ENSMUST00000109111 Gpr37l1Q99JG2 481 aa10.57□□□□□ -0.72
Clk4-202ENSMUST00000109111 Gm4788E9Q8B5 879 aa10.56□□□□□ -0.72
Clk4-202ENSMUST00000109111 Gm19402J3QJV4 266 aa10.53□□□□□ -0.72
Clk4-202ENSMUST00000109111 Kcnc4Q8R1C0 628 aa10.53□□□□□ -0.72
Clk4-202ENSMUST00000109111 Fam193bQ3U2K0 892 aa10.52□□□□□ -0.73
Clk4-202ENSMUST00000109111 Slc4a9E9PUP3 929 aa10.51□□□□□ -0.73
Clk4-202ENSMUST00000109111 Skap1Q3UUV5 355 aa10.51□□□□□ -0.73
Clk4-202ENSMUST00000109111 Foxd4Q60688 444 aa10.5□□□□□ -0.73
Clk4-202ENSMUST00000109111 Scube2Q9JJS0 997 aa10.49□□□□□ -0.73
Clk4-202ENSMUST00000109111 2310050C09RikG5E8Z3 280 aa10.47□□□□□ -0.73
Clk4-202ENSMUST00000109111 Hmx2P43687 273 aa10.47□□□□□ -0.73
Clk4-202ENSMUST00000109111 Fam160a1Q505K2 1081 aa10.46□□□□□ -0.74
Clk4-202ENSMUST00000109111 Abcc9P70170 1546 aa10.45□□□□□ -0.74
Clk4-202ENSMUST00000109111 Zeb1Q64318 1117 aa10.43□□□□□ -0.74
Clk4-202ENSMUST00000109111 Wbp1lQ8BGW2 348 aa10.41□□□□□ -0.74
Clk4-202ENSMUST00000109111 NntQ61941 1086 aaKnown RBP10.39□□□□□ -0.75
Clk4-202ENSMUST00000109111 Abcc8B2RUS7 1588 aa10.37□□□□□ -0.75
Clk4-202ENSMUST00000109111 Pde8bE9Q4S1 865 aa10.37□□□□□ -0.75
Clk4-202ENSMUST00000109111 LtbrP50284 415 aa10.37□□□□□ -0.75
Clk4-202ENSMUST00000109111 Slc27a5Q4LDG0 689 aa10.37□□□□□ -0.75
Clk4-202ENSMUST00000109111 Gpc1Q9QZF2 557 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms