RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 AI481877A2ALV5 1481 aa29.93■■■□□ 2.38
Trim47-201ENSMUST00000021120 Igf1rQ60751 1373 aa29.93■■■□□ 2.38
Trim47-201ENSMUST00000021120 1700123L14RikQ3V2K7 440 aa29.91■■■□□ 2.38
Trim47-201ENSMUST00000021120 Wdr7Q920I9 1489 aa29.88■■■□□ 2.37
Trim47-201ENSMUST00000021120 Fam208aQ69ZR9 1610 aaKnown RBP29.88■■■□□ 2.37
Trim47-201ENSMUST00000021120 Adcy10Q8C0T9 1614 aa29.87■■■□□ 2.37
Trim47-201ENSMUST00000021120 Col17a1Q07563 1470 aa29.86■■■□□ 2.37
Trim47-201ENSMUST00000021120 Ifnlr1Q8CGK5 535 aa29.86■■■□□ 2.37
Trim47-201ENSMUST00000021120 Gm156Q58A37 223 aa29.85■■■□□ 2.37
Trim47-201ENSMUST00000021120 Adgrl3Q80TS3 1537 aa29.85■■■□□ 2.37
Trim47-201ENSMUST00000021120 Atp10dQ8K2X1 1416 aa29.85■■■□□ 2.37
Trim47-201ENSMUST00000021120 Arhgef40Q3UPH7 1517 aa29.82■■■□□ 2.36
Trim47-201ENSMUST00000021120 Abca8bQ8K440 1620 aa29.82■■■□□ 2.36
Trim47-201ENSMUST00000021120 A2mQ6GQT1 1474 aa29.81■■■□□ 2.36
Trim47-201ENSMUST00000021120 Lrrc9Q8CDN9 1456 aa29.81■■■□□ 2.36
Trim47-201ENSMUST00000021120 Znf608Q56A10 1511 aa29.8■■■□□ 2.36
Trim47-201ENSMUST00000021120 Fam50aQ9WV03 339 aaKnown RBP29.77■■■□□ 2.36
Trim47-201ENSMUST00000021120 Mlh3A0A1Y7VMP7 1443 aa29.77■■■□□ 2.36
Trim47-201ENSMUST00000021120 Aebp2Q9Z248 504 aaKnown RBP29.74■■■□□ 2.35
Trim47-201ENSMUST00000021120 Rnf17Q99MV7 1640 aa29.73■■■□□ 2.35
Trim47-201ENSMUST00000021120 Kdm6bQ5NCY0 1641 aa29.73■■■□□ 2.35
Trim47-201ENSMUST00000021120 ClspnQ80YR7 1315 aa29.72■■■□□ 2.35
Trim47-201ENSMUST00000021120 Caskin1Q6P9K8 1431 aa29.72■■■□□ 2.35
Trim47-201ENSMUST00000021120 Naip2Q9QUK4 1447 aa29.7■■■□□ 2.35
Trim47-201ENSMUST00000021120 Ak9G3UYQ4 1894 aa29.69■■■□□ 2.34
Trim47-201ENSMUST00000021120 Arhgap5P97393 1501 aa29.69■■■□□ 2.34
Trim47-201ENSMUST00000021120 Plekhh2Q8C115 1491 aa29.69■■■□□ 2.34
Trim47-201ENSMUST00000021120 Setbp1Q9Z180 1582 aa29.68■■■□□ 2.34
Trim47-201ENSMUST00000021120 Tdrd9Q14BI7 1383 aa29.68■■■□□ 2.34
Trim47-201ENSMUST00000021120 Cdk11bP24788 784 aaKnown RBP29.67■■■□□ 2.34
Trim47-201ENSMUST00000021120 Abcc5Q9R1X5 1436 aa29.66■■■□□ 2.34
Trim47-201ENSMUST00000021120 Csrnp3P59055 597 aa29.66■■■□□ 2.34
Trim47-201ENSMUST00000021120 Mia2Q91ZV0 1396 aa29.64■■■□□ 2.34
Trim47-201ENSMUST00000021120 Arid3cA6PWV5 409 aa29.64■■■□□ 2.34
Trim47-201ENSMUST00000021120 Mtus2Q3UHD3 1353 aa29.63■■■□□ 2.33
Trim47-201ENSMUST00000021120 Wdr66E9Q743 1299 aa29.61■■■□□ 2.33
Trim47-201ENSMUST00000021120 UacaQ8CGB3 1411 aa29.6■■■□□ 2.33
Trim47-201ENSMUST00000021120 Chic2Q9D9G3 165 aa29.6■■■□□ 2.33
Trim47-201ENSMUST00000021120 Fhad1A6PWD2 1420 aa29.58■■■□□ 2.33
Trim47-201ENSMUST00000021120 Gm32742A0A1B0GT42 1604 aa29.58■■■□□ 2.33
Trim47-201ENSMUST00000021120 Pprc1Q6NZN1 1644 aa29.56■■■□□ 2.32
Trim47-201ENSMUST00000021120 Pdcd11Q6NS46 1862 aaKnown RBP29.56■■■□□ 2.32
Trim47-201ENSMUST00000021120 Cfap74Q3UY96 1578 aa29.55■■■□□ 2.32
Trim47-201ENSMUST00000021120 Vps8Q0P5W1 1427 aa29.54■■■□□ 2.32
Trim47-201ENSMUST00000021120 Nop58Q6DFW4 536 aaKnown RBP29.53■■■□□ 2.32
Trim47-201ENSMUST00000021120 Cabp1Q9JLK7 227 aa29.52■■■□□ 2.32
Trim47-201ENSMUST00000021120 Zfyve16Q80U44 1528 aa29.51■■■□□ 2.31
Trim47-201ENSMUST00000021120 Aplp2Q06335 707 aa29.49■■■□□ 2.31
Trim47-201ENSMUST00000021120 Rfx7F8VPJ6 1459 aa29.49■■■□□ 2.31
Trim47-201ENSMUST00000021120 Trappc8E9PWG2 1437 aa29.48■■■□□ 2.31
Trim47-201ENSMUST00000021120 DiexfQ8BTT6 772 aaKnown RBP29.47■■■□□ 2.31
Trim47-201ENSMUST00000021120 Il16O54824 1322 aa29.46■■■□□ 2.31
Trim47-201ENSMUST00000021120 Kdm3bQ6ZPY7 1562 aa29.44■■■□□ 2.3
Trim47-201ENSMUST00000021120 Abcc3B2RX12 1523 aa29.43■■■□□ 2.3
Trim47-201ENSMUST00000021120 SphkapQ6NSW3 1687 aa29.43■■■□□ 2.3
Trim47-201ENSMUST00000021120 Ttbk1Q6PCN3 1308 aa29.42■■■□□ 2.3
Trim47-201ENSMUST00000021120 Clasp1Q80TV8 1535 aaKnown RBP29.41■■■□□ 2.3
Trim47-201ENSMUST00000021120 TonslQ6NZL6 1363 aa29.4■■■□□ 2.3
Trim47-201ENSMUST00000021120 NclP09405 707 aaKnown RBP29.4■■■□□ 2.3
Trim47-201ENSMUST00000021120 Abca9Q8K449 1623 aa29.4■■■□□ 2.3
Trim47-201ENSMUST00000021120 Hecw1Q8K4P8 1604 aa29.39■■■□□ 2.3
Trim47-201ENSMUST00000021120 Kidins220E9Q9B7 1793 aa29.39■■■□□ 2.3
Trim47-201ENSMUST00000021120 Adgrb2Q8CGM1 1561 aa29.37■■■□□ 2.29
Trim47-201ENSMUST00000021120 Fmn2Q9JL04 1578 aa29.37■■■□□ 2.29
Trim47-201ENSMUST00000021120 Sart1Q9Z315 806 aaKnown RBP29.36■■■□□ 2.29
Trim47-201ENSMUST00000021120 Ppp1r18Q8BQ30 594 aa29.34■■■□□ 2.29
Trim47-201ENSMUST00000021120 Dennd4bQ3U1Y4 1499 aa29.33■■■□□ 2.29
Trim47-201ENSMUST00000021120 Depdc5P61460 1591 aa29.32■■■□□ 2.28
Trim47-201ENSMUST00000021120 Ube2uB1AUC4 352 aa29.31■■■□□ 2.28
Trim47-201ENSMUST00000021120 Cdc42bpbQ7TT50 1713 aa29.31■■■□□ 2.28
Trim47-201ENSMUST00000021120 Mast1Q9R1L5 1570 aa29.3■■■□□ 2.28
Trim47-201ENSMUST00000021120 Ttc37F8VPK0 1563 aa29.29■■■□□ 2.28
Trim47-201ENSMUST00000021120 Ccer2J3QPU5 274 aa29.28■■■□□ 2.28
Trim47-201ENSMUST00000021120 AglF8VPN4 1532 aa29.28■■■□□ 2.28
Trim47-201ENSMUST00000021120 Neurl4Q5NCX5 1563 aa29.28■■■□□ 2.28
Trim47-201ENSMUST00000021120 Adgrl2Q8JZZ7 1487 aa29.25■■■□□ 2.27
Trim47-201ENSMUST00000021120 Dnajc5P60904 198 aa29.22■■■□□ 2.27
Trim47-201ENSMUST00000021120 Lemd3Q9WU40 921 aa29.21■■■□□ 2.27
Trim47-201ENSMUST00000021120 Rrp7aQ9D1C9 280 aaKnown RBP29.2■■■□□ 2.26
Trim47-201ENSMUST00000021120 Fhod3Q76LL6 1578 aa29.18■■■□□ 2.26
Trim47-201ENSMUST00000021120 AlkP97793 1621 aa29.16■■■□□ 2.26
Trim47-201ENSMUST00000021120 OvosQ3UU35 1456 aa29.14■■■□□ 2.25
Trim47-201ENSMUST00000021120 Prdm16A2A935 1275 aa29.13■■■□□ 2.25
Trim47-201ENSMUST00000021120 Eid3Q3V124 375 aa29.13■■■□□ 2.25
Trim47-201ENSMUST00000021120 Zfp644E9QA22 1323 aa29.11■■■□□ 2.25
Trim47-201ENSMUST00000021120 Ankrd36D3Z4K0 1415 aa29.1■■■□□ 2.25
Trim47-201ENSMUST00000021120 AdgbG3UZ78 1657 aa29.09■■■□□ 2.25
Trim47-201ENSMUST00000021120 Map3k5O35099 1380 aa29.09■■■□□ 2.25
Trim47-201ENSMUST00000021120 Ssh2Q5SW75 1423 aa29.08■■■□□ 2.25
Trim47-201ENSMUST00000021120 Kdm5cP41230 1554 aa29.08■■■□□ 2.25
Trim47-201ENSMUST00000021120 Ppargc1bQ8VHJ7 1014 aa29.06■■■□□ 2.24
Trim47-201ENSMUST00000021120 Kiaa0556Q8C753 1610 aa29.06■■■□□ 2.24
Trim47-201ENSMUST00000021120 Bcl11aQ9QYE3 773 aa29.03■■■□□ 2.24
Trim47-201ENSMUST00000021120 Trpm2Q91YD4 1506 aa29.02■■■□□ 2.24
Trim47-201ENSMUST00000021120 Mphosph9A6H5Y1 991 aa29.02■■■□□ 2.24
Trim47-201ENSMUST00000021120 Xrn1P97789 1719 aaKnown RBP29.02■■■□□ 2.24
Trim47-201ENSMUST00000021120 Nup155Q99P88 1391 aaKnown RBP29.01■■■□□ 2.23
Trim47-201ENSMUST00000021120 Lamc1P02468 1607 aaKnown RBP29■■■□□ 2.23
Trim47-201ENSMUST00000021120 Abca17E9PX95 1733 aa29■■■□□ 2.23
Trim47-201ENSMUST00000021120 Atp10aO54827 1508 aa28.99■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms