RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 ZNF507Q8TCN5 953 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 NLRC4Q9NPP4 1024 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 EPHB6O15197 1021 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 TNNI2P48788 182 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 SPTY2D1Q68D10 685 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 HNRNPLLQ8WVV9 542 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 DNAJC7Q99615 494 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 BCL9LQ86UU0 1499 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 PDE2AO00408 941 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-221ENST00000640341 RNF40O75150 1001 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 MOCS3O95396 460 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 CCNE1P24864 410 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 EZH2Q15910 746 aaKnown RBP16.27■□□□□ 0.2
SCARB2-221ENST00000640341 KCTD19Q17RG1 926 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-221ENST00000640341 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 SECISBP2LQ93073 1101 aaKnown RBP16.27■□□□□ 0.2
SCARB2-221ENST00000640341 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
SCARB2-221ENST00000640341 C6orf50Q9HD87 102 aa16.27■□□□□ 0.2
SCARB2-221ENST00000640341 BUB1O43683 1085 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 SRGNP10124 158 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 MYBL2P10244 700 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 BTDP43251 543 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.19
SCARB2-221ENST00000640341 TUBB2AQ13885 445 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 SBK1Q52WX2 424 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 NEK8Q86SG6 692 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.19
SCARB2-221ENST00000640341 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.19
SCARB2-221ENST00000640341 TUBB2BQ9BVA1 445 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 ACBD3Q9H3P7 528 aa16.27■□□□□ 0.19
SCARB2-221ENST00000640341 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-221ENST00000640341 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 RASA1P20936 1047 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 ACTN2P35609 894 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 PTPROQ16827 1216 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 MYH14Q7Z406 1995 aaKnown RBP16.26■□□□□ 0.19
SCARB2-221ENST00000640341 NCK2O43639 380 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 TDP2O95551 362 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 USP14P54578 494 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-221ENST00000640341 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CCSER1Q9C0I3 900 aa16.26■□□□□ 0.19
SCARB2-221ENST00000640341 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
SCARB2-221ENST00000640341 LRP5O75197 1615 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 PSMD14O00487 310 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 CDK8P49336 464 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 ZBED6P86452 979 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 KCNB1Q14721 858 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 TTC19Q6DKK2 380 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-221ENST00000640341 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 REXO1Q8N1G1 1221 aaKnown RBP16.25■□□□□ 0.19
SCARB2-221ENST00000640341 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 HDAC7Q8WUI4 952 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 A0A1W2PQC6 194 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 FECHP22830 423 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-221ENST00000640341 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 EIF4A3P38919 411 aaKnown RBP16.25■□□□□ 0.19
SCARB2-221ENST00000640341 AMPD3Q01432 767 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 NFRKBQ6P4R8 1299 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
SCARB2-221ENST00000640341 DOCK2Q92608 1830 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 CACNA1SQ13698 1873 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 ZNF263O14978 683 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 GNA11P29992 359 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 CALCRLQ16602 461 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 UBE2SQ16763 222 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 GOLGA5Q8TBA6 731 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 USO1O60763 962 aaKnown RBP16.24■□□□□ 0.19
SCARB2-221ENST00000640341 SLURP2P0DP57 97 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 APBA1Q02410 837 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
SCARB2-221ENST00000640341 MYMKA6NI61 221 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 UFL1O94874 794 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms