RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 F5H6K3 240 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 OAZ1P54368 228 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 KLRC3Q07444 240 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 TAPT1Q6NXT6 567 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 ASCL5Q7RTU5 278 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 SAMD11Q96NU1 681 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
PTP4A1-207ENST00000639568 RAD50Q92878 1312 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 GNAI2P04899 355 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 SELPP16109 830 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 ZXDAP98168 799 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 GPM6BQ13491 265 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 PTGISQ16647 500 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 DUSP28Q4G0W2 176 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 EPC2Q52LR7 807 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 TMEM63BQ5T3F8 832 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 RPAINQ86UA6 219 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 DDRGK1Q96HY6 314 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
PTP4A1-207ENST00000639568 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 H3BNC9 293 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 MBTPS2O43462 519 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 KPNA6O60684 536 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 KDM4AO75164 1064 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 AVPR2P30518 371 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 LRRC8DQ7L1W4 858 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
PTP4A1-207ENST00000639568 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 PRR23AA6NEV1 266 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 NDUFB10O96000 172 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 AMHP03971 560 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 TLR7Q9NYK1 1049 aaKnown RBP13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
PTP4A1-207ENST00000639568 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 E9PSI1 815 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 KRT37O76014 449 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 FDX1P10109 184 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 PDE6AP16499 860 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 LTBRP36941 435 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 NUBP1P53384 320 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
PTP4A1-207ENST00000639568 ZNF532Q9HCE3 1301 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 DCHS1Q96JQ0 3298 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 CXCL10P02778 98 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 GPNMBQ14956 572 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 YME1L1Q96TA2 773 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 ALG13Q9NP73 1137 aaKnown RBP13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 CD207Q9UJ71 328 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 TECTAO75443 2155 aa13.17□□□□□ -0.3
PTP4A1-207ENST00000639568 PRKAB2O43741 272 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 NBNO60934 754 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 ALAS1P13196 640 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 HTRA4P83105 476 aaPredicted RBP13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 SCN5AQ14524 2016 aa13.16□□□□□ -0.3
PTP4A1-207ENST00000639568 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms