RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 USP38Q8NB14 1042 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 FAM20AQ96MK3 541 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 JAG1P78504 1218 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 ARID5BQ14865 1188 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 NBPF12Q5TAG4 269 aaPredicted RBP7.54□□□□□ -1.2
RTTN-215ENST00000639487 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
RTTN-215ENST00000639487 SAMD11Q96NU1 681 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 CABP5Q9NP86 173 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 TRIM6-TRIM34B2RNG4 842 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 GOLIM4O00461 696 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 KIAA0391O15091 583 aaKnown RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 EGFRP00533 1210 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 BMP3P12645 472 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 TAPT1Q6NXT6 567 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 APOA5Q6Q788 366 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 MFSD6Q6ZSS7 791 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 MTMR9Q96QG7 549 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 RC3H2Q9HBD1 1191 aaKnown RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTTN-215ENST00000639487 ZNF213O14771 459 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 PPP6R2O75170 966 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 DUSP11O75319 330 aaKnown RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 APPP05067 770 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 SFNP31947 248 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 HERVK_113P62684 666 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 SART3Q15020 963 aaKnown RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 NT5DC1Q5TFE4 455 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 PHOSPHO2Q8TCD6 241 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 C5orf67F2Z3F1 127 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 NUBP1P53384 320 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 EHHADHQ08426 723 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 TARBP2Q15633 366 aaKnown RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 KYAT1Q16773 422 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 CDCA2Q69YH5 1023 aaPredicted RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 APBB2Q92870 758 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 NEK1Q96PY6 1258 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 ASCC2Q9H1I8 757 aaPredicted RBP7.53□□□□□ -1.2
RTTN-215ENST00000639487 TUFT1Q9NNX1 390 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 PICK1Q9NRD5 415 aa7.53□□□□□ -1.2
RTTN-215ENST00000639487 A0A1W2PRG0 241 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 GPR25O00155 361 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 ST3GAL1Q11201 340 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 BMT2Q1RMZ1 405 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 TRAF7Q6Q0C0 670 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 MICALL1Q8N3F8 863 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 TIGD1Q96MW7 591 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 SPATC1LQ9H0A9 340 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 TDRD3Q9H7E2 651 aaKnown RBP7.52□□□□□ -1.21
RTTN-215ENST00000639487 ACAD9Q9H845 621 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 DKC1O60832 514 aaKnown RBP eCLIP7.52□□□□□ -1.21
RTTN-215ENST00000639487 NDUFB10O96000 172 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 STAT2P52630 851 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 SPIRE1Q08AE8 756 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 ALCAMQ13740 583 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 LHX8Q68G74 356 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 CYB5R4Q7L1T6 521 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 ARMCX2Q7L311 632 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 VPS37DQ86XT2 251 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 SPATA20Q8TB22 786 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 KLHDC4Q8TBB5 520 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 LENG9Q96B70 501 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 ZSCAN16Q9H4T2 348 aaPredicted RBP7.52□□□□□ -1.21
RTTN-215ENST00000639487 POLR3EQ9NVU0 708 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 CYP39A1Q9NYL5 469 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 MAFBQ9Y5Q3 323 aaPredicted RBP7.52□□□□□ -1.21
RTTN-215ENST00000639487 STYXL1Q9Y6J8 313 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 SMCHD1A6NHR9 2005 aa7.52□□□□□ -1.21
RTTN-215ENST00000639487 MEIS1O00470 390 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
RTTN-215ENST00000639487 KDM4AO75164 1064 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 GJB1P08034 283 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 AKR1B1P15121 316 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 TCF3P15923 654 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
RTTN-215ENST00000639487 DOK7Q18PE1 504 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ANKRD45Q5TZF3 282 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 VSIG10LQ86VR7 867 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 C16orf71Q8IYS4 520 aaPredicted RBP7.51□□□□□ -1.21
RTTN-215ENST00000639487 ZNF276Q8N554 614 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ETNPPLQ8TBG4 499 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 NAPBQ9H115 298 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 JMJD4Q9H9V9 463 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 JADE2Q9NQC1 790 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 TMOD4Q9NZQ9 345 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 PFKLP17858 780 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 PPP1R2P41236 205 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ZNF131P52739 623 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 TMEM119Q4V9L6 283 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ZFPM1Q8IX07 1006 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 FSD1Q9BTV5 496 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 LMAN2LQ9H0V9 348 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms