RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 KCNQ3O43525 872 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 SRGAP2BP0DMP2 458 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 PPP2R3AQ06190 1150 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 FAM173BQ6P4H8 233 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 ZFYVE9O95405 1425 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 LEMD3Q9Y2U8 911 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 SCN4BQ8IWT1 228 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 ZNF513Q8N8E2 541 aaPredicted RBP17.58■□□□□ 0.4
CLN5-208ENST00000636183 PDCD6IPQ8WUM4 868 aaKnown RBP17.58■□□□□ 0.4
CLN5-208ENST00000636183 EFCC1Q9HA90 598 aa17.58■□□□□ 0.4
CLN5-208ENST00000636183 ARHGEF37A1IGU5 675 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 ZNF202O95125 648 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 IFT20Q8IY31 132 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 N4BP1O75113 896 aaKnown RBP17.57■□□□□ 0.4
CLN5-208ENST00000636183 LRRC24Q50LG9 513 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 FIS1Q9Y3D6 152 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 TTLL1O95922 423 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 BFSP1Q12934 665 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 MFSD14CQ5VZR4 134 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLN5-208ENST00000636183 GOLGA8SH3BPF8 625 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 BUB1BO60566 1050 aaPredicted RBP17.57■□□□□ 0.4
CLN5-208ENST00000636183 KCNJ6P48051 423 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 ATL3Q6DD88 541 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 SCARA5Q6ZMJ2 495 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 FAM8A1Q9UBU6 413 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
CLN5-208ENST00000636183 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 RFC1P35251 1148 aaPredicted RBP17.57■□□□□ 0.4
CLN5-208ENST00000636183 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 UPP2O95045 317 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 SLC39A2Q9NP94 309 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 KIAA1024Q9UPX6 916 aa17.57■□□□□ 0.4
CLN5-208ENST00000636183 PHBP35232 272 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 RAB44Q7Z6P3 723 aaPredicted RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 PNOCQ13519 176 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 VSIG1Q86XK7 387 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 GBP7Q8N8V2 638 aaPredicted RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 EBAG9O00559 213 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 ACTN1P12814 892 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 PDXDC2PQ6P474 469 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 NBPF11Q86T75 865 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 URGCPQ8TCY9 931 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 TNKSO95271 1327 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 MYO1EQ12965 1108 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 ANGPTL8Q6UXH0 198 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 UNC5CLQ8IV45 518 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 DOLKQ9UPQ8 538 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 ZNF233A6NK53 670 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 GARSP41250 739 aaKnown RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 RWDD4Q6NW29 188 aaKnown RBP17.56■□□□□ 0.4
CLN5-208ENST00000636183 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 SLC4A7Q9Y6M7 1214 aa17.56■□□□□ 0.4
CLN5-208ENST00000636183 SEMA3EO15041 775 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 MYL7Q01449 175 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 THEM5Q8N1Q8 247 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 GNAT1P11488 350 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 BMP3P12645 472 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 NPR1P16066 1061 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 FANCCQ00597 558 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 VCXQ9H320 206 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
CLN5-208ENST00000636183 NSFP46459 744 aaKnown RBP17.55■□□□□ 0.4
CLN5-208ENST00000636183 DENND2CQ68D51 928 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 CATSPER4Q7RTX7 472 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 PPP2R3CQ969Q6 453 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
CLN5-208ENST00000636183 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
CLN5-208ENST00000636183 DCAF4L1Q3SXM0 396 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 MMEL1Q495T6 779 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 DNAAF3Q8N9W5 541 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 SLC13A4Q9UKG4 626 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 BBOX1O75936 387 aa17.55■□□□□ 0.4
CLN5-208ENST00000636183 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
CLN5-208ENST00000636183 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
CLN5-208ENST00000636183 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 HEXIM2Q96MH2 286 aaKnown RBP17.54■□□□□ 0.4
CLN5-208ENST00000636183 MEIS1O00470 390 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 ESRRBO95718 433 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 CD58P19256 250 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 CCDC13Q8IYE1 715 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 DPF3Q92784 378 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 FGD4Q96M96 766 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 SRPK1Q96SB4 655 aaKnown RBP17.54■□□□□ 0.4
CLN5-208ENST00000636183 BUB1O43683 1085 aa17.54■□□□□ 0.4
CLN5-208ENST00000636183 EIF2AK2P19525 551 aaKnown RBP17.54■□□□□ 0.4
CLN5-208ENST00000636183 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
CLN5-208ENST00000636183 AFG1LQ8WV93 481 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms