RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 TMEM232C9JQI7 657 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 GOLGA5Q8TBA6 731 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 GARSP41250 739 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 POLR2FP61218 127 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 LRRC23Q53EV4 343 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 C17orf53Q8N3J3 647 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 EEF2KMTQ96G04 330 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 UHMK1Q8TAS1 419 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 SDCCAG3Q96C92 435 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 GADD45BO75293 160 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 BFSP1Q12934 665 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 RFX6Q8HWS3 928 aa17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 ARMCX3Q9UH62 379 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-221ENST00000636012 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 MUM1Q2TAK8 710 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 FAM71BQ8TC56 605 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 HAUS8Q9BT25 410 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 INO80B-WBP1J3KQ70 363 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 HSP90AA5PQ58FG0 334 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 SBNO1A3KN83 1393 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 N4BP1O75113 896 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 EEPD1Q7L9B9 569 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 SAR1BQ9Y6B6 198 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 VGLL3A8MV65 326 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 COBLO75128 1261 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 RETREG2Q8NC44 543 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 SERPINB6P35237 376 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 DPH5Q9H2P9 285 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 POLIQ9UNA4 740 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 FIS1Q9Y3D6 152 aa17.41■□□□□ 0.38
CACNA1A-221ENST00000636012 BNIP3LO60238 219 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 SETSIPP0DME0 302 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 MARK3P27448 753 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 TBCCQ15814 346 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 ATF2P15336 505 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 KCTD2Q14681 263 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 TMEM259Q4ZIN3 620 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 NAA35Q5VZE5 725 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 GCNAQ96QF7 691 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 RNF40O75150 1001 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 KCTD17Q8N5Z5 321 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 LRGUKQ96M69 825 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 MIS12Q9H081 205 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 VCX3AQ9NNX9 186 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 SLC12A6Q9UHW9 1150 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 NVLO15381 856 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 CLCN1P35523 988 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 CDC26Q8NHZ8 85 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 QTRT2Q9H974 415 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 MYL7Q01449 175 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 TFDP1Q14186 410 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 MIS18BP1Q6P0N0 1132 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 CCNYQ8ND76 341 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
CACNA1A-221ENST00000636012 PEX19P40855 299 aa17.39■□□□□ 0.38
CACNA1A-221ENST00000636012 ALKBH8Q96BT7 664 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-221ENST00000636012 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 RASSF4Q9H2L5 321 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 OR52Z1P0C646 297 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 SLFN13Q68D06 897 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 RAB44Q7Z6P3 723 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 H0YCG3 227 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 HNRNPDLO14979 420 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 GJA10Q969M2 543 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 PDCD2Q16342 344 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 TMCO5AQ8N6Q1 288 aa17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 ZNF513Q8N8E2 541 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-221ENST00000636012 BAIAP2L1Q9UHR4 511 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 COL17A1Q9UMD9 1497 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 SGSM2O43147 1006 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 XPOTO43592 962 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 OSTNP61366 133 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 CCNA1P78396 465 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 ADAM9Q13443 819 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms